RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 MCM3APO60318 1980 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 PPFIA3O75145 1194 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 IGHA2P01877 340 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 HSP90AA1P07900 732 aaKnown RBP18.33■□□□□ 0.52
FDPS-201ENST00000356657 ALDH5A1P51649 535 aaPredicted RBP18.33■□□□□ 0.52
FDPS-201ENST00000356657 SLC9C1Q4G0N8 1177 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 NPLOC4Q8TAT6 608 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 C8orf76Q96K31 380 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 PHF20Q9BVI0 1012 aa18.33■□□□□ 0.52
FDPS-201ENST00000356657 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
FDPS-201ENST00000356657 STAM2O75886 525 aa18.32■□□□□ 0.52
FDPS-201ENST00000356657 EDNRBP24530 442 aa18.32■□□□□ 0.52
FDPS-201ENST00000356657 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
FDPS-201ENST00000356657 CNTN2Q02246 1040 aa18.32■□□□□ 0.52
FDPS-201ENST00000356657 SAFBQ15424 915 aaKnown RBP eCLIP18.32■□□□□ 0.52
FDPS-201ENST00000356657 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
FDPS-201ENST00000356657 PXMP2Q9NR77 195 aa18.32■□□□□ 0.52
FDPS-201ENST00000356657 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 GJB2P29033 226 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
FDPS-201ENST00000356657 UBXN2AP68543 259 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 ARHGEF16Q5VV41 709 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 BLIDQ8IZY5 108 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 FBXO18Q8NFZ0 1043 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 TRIB2Q92519 343 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 TBC1D5Q92609 795 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 FGD4Q96M96 766 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 ABHD16BQ9H3Z7 469 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 COL20A1Q9P218 1284 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 RPTORQ8N122 1335 aa18.31■□□□□ 0.52
FDPS-201ENST00000356657 MMP1P03956 469 aa18.3■□□□□ 0.52
FDPS-201ENST00000356657 ARMCX2Q7L311 632 aa18.3■□□□□ 0.52
FDPS-201ENST00000356657 FCHSD1Q86WN1 690 aa18.3■□□□□ 0.52
FDPS-201ENST00000356657 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
FDPS-201ENST00000356657 KIAA1217Q5T5P2 1943 aa18.3■□□□□ 0.52
FDPS-201ENST00000356657 ASTN1O14525 1302 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 PDE4DQ08499 809 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 KRT25Q7Z3Z0 450 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 ARMC5Q96C12 935 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 TAAR1Q96RJ0 339 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 PDCD2LQ9BRP1 358 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 VTA1Q9NP79 307 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 PCDHA6Q9UN73 950 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 PCDHA8Q9Y5H6 950 aa18.29■□□□□ 0.52
FDPS-201ENST00000356657 ELNP15502 786 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 CAPN2P17655 700 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 CCND2P30279 289 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 KRT2P35908 639 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 SREBF1P36956 1147 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 ANP32AP39687 249 aaKnown RBP18.28■□□□□ 0.52
FDPS-201ENST00000356657 SOX10P56693 466 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 PGM5Q15124 567 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 NPY5RQ15761 445 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 STXBP2Q15833 593 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 CCL14Q16627 93 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 UBE2SQ16763 222 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 KRT40Q6A162 431 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 SHISA4Q96DD7 197 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 ANO3Q9BYT9 981 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 MYH7BA7E2Y1 1941 aa18.28■□□□□ 0.52
FDPS-201ENST00000356657 M0R2N6 131 aa18.27■□□□□ 0.52
FDPS-201ENST00000356657 EIF3JO75822 258 aaKnown RBP18.27■□□□□ 0.52
FDPS-201ENST00000356657 INHAP05111 366 aa18.27■□□□□ 0.52
FDPS-201ENST00000356657 NR3C2P08235 984 aa18.27■□□□□ 0.52
FDPS-201ENST00000356657 FOXP1Q9H334 677 aaPredicted RBP18.27■□□□□ 0.52
FDPS-201ENST00000356657 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
FDPS-201ENST00000356657 FLRT1Q9NZU1 646 aa18.27■□□□□ 0.52
FDPS-201ENST00000356657 MSCO60682 206 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 EIF2AK2P19525 551 aaKnown RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 GNPTABQ3T906 1256 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 VSIG10LQ86VR7 867 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 CCDC194A0A1B0GVG4 234 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 H3BQV1 296 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 SNAI1O95863 264 aaPredicted RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 CYBAP13498 195 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 CYP2C19P33261 490 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 DIS3L2Q8IYB7 885 aaKnown RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 ZNF333Q96JL9 665 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
FDPS-201ENST00000356657 NAP1L4Q99733 375 aaKnown RBP18.26■□□□□ 0.51
FDPS-201ENST00000356657 MAFGO15525 162 aa18.25■□□□□ 0.51
FDPS-201ENST00000356657 MYCP01106 439 aaPredicted RBP18.25■□□□□ 0.51
FDPS-201ENST00000356657 CYP3A4P08684 503 aa18.25■□□□□ 0.51
FDPS-201ENST00000356657 USP11P51784 963 aa18.25■□□□□ 0.51
FDPS-201ENST00000356657 CACNB2Q08289 660 aaPredicted RBP18.25■□□□□ 0.51
FDPS-201ENST00000356657 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
FDPS-201ENST00000356657 NONOQ15233 471 aaKnown RBP eCLIP18.25■□□□□ 0.51
FDPS-201ENST00000356657 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
FDPS-201ENST00000356657 SH3TC2Q8TF17 1288 aa18.25■□□□□ 0.51
FDPS-201ENST00000356657 PURBQ96QR8 312 aaKnown RBP18.25■□□□□ 0.51
FDPS-201ENST00000356657 HMX1Q9NP08 348 aaPredicted RBP18.25■□□□□ 0.51
FDPS-201ENST00000356657 SEPT4O43236 478 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms