RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PPP1R3GB7ZBB8 358 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 C19orf81C9J6K1 198 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 ZNF500O60304 480 aaPredicted RBP19.4■□□□□ 0.7
VPS13B-201ENST00000355155 PTPRAP18433 802 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 SH3D19Q5HYK7 790 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 ZNF658Q5TYW1 1059 aaPredicted RBP19.4■□□□□ 0.7
VPS13B-201ENST00000355155 PNMA5Q96PV4 448 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 SLC38A10Q9HBR0 1119 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 RHOBTB3O94955 611 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 INPP5BP32019 993 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 SUPT20HL1Q3ZLR7 823 aa19.4■□□□□ 0.7
VPS13B-201ENST00000355155 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.4■□□□□ 0.7
VPS13B-201ENST00000355155 PP2D1A8MPX8 630 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 PLCG1P19174 1290 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 EPS15P42566 896 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 TECP42680 631 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 BACE1P56817 501 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 MED15Q96RN5 788 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 PPP1R9AQ9ULJ8 1098 aa19.39■□□□□ 0.7
VPS13B-201ENST00000355155 MYPNQ86TC9 1320 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 KDM3AQ9Y4C1 1321 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 RPN1P04843 607 aaKnown RBP19.39■□□□□ 0.69
VPS13B-201ENST00000355155 SPIRE1Q08AE8 756 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 IKQ13123 557 aaPredicted RBP19.39■□□□□ 0.69
VPS13B-201ENST00000355155 DHX8Q14562 1220 aaKnown RBP19.39■□□□□ 0.69
VPS13B-201ENST00000355155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.39■□□□□ 0.69
VPS13B-201ENST00000355155 TRIM5Q9C035 493 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 EHMT1Q9H9B1 1298 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 GGA3Q9NZ52 723 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 IMPACTQ9P2X3 320 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 LRWD1Q9UFC0 647 aa19.39■□□□□ 0.69
VPS13B-201ENST00000355155 SPDYE3A6NKU9 549 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 CLCN1P35523 988 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 OAZ1P54368 228 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 LDHDQ86WU2 507 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 CALML4Q96GE6 196 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 GCOM1H8Y6P7 765 aaPredicted RBP19.38■□□□□ 0.69
VPS13B-201ENST00000355155 POLR2MP0CAP2 368 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 YBX3P16989 372 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS13B-201ENST00000355155 PPP1R2P41236 205 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 AFMP43652 599 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 FOXR2Q6PJQ5 311 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 ZNF280CQ8ND82 737 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 BLOC1S4Q9NUP1 217 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 SMCHD1A6NHR9 2005 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 IGLV3-22A0A075B6J6 115 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 RAD21O60216 631 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 CLEC4DQ8WXI8 215 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 LRRC27Q9C0I9 530 aa19.38■□□□□ 0.69
VPS13B-201ENST00000355155 TTC12Q9H892 705 aaPredicted RBP19.38■□□□□ 0.69
VPS13B-201ENST00000355155 ATP2A1O14983 1001 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 VCAM1P19320 739 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 TXKP42681 527 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 SNAP25P60880 206 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 AMPD3Q01432 767 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 NIPA1Q7RTP0 329 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 RRAGDQ9NQL2 400 aaPredicted RBP19.37■□□□□ 0.69
VPS13B-201ENST00000355155 POLR2AP24928 1970 aaKnown RBP19.37■□□□□ 0.69
VPS13B-201ENST00000355155 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.69
VPS13B-201ENST00000355155 USH1GQ495M9 461 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 REPS2Q8NFH8 660 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 KIFC2Q96AC6 838 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 FEZ1Q99689 392 aa19.37■□□□□ 0.69
VPS13B-201ENST00000355155 COL11A1P12107 1806 aaPredicted RBP19.36■□□□□ 0.69
VPS13B-201ENST00000355155 SPATA1Q5VX52 437 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 ZC3H15Q8WU90 426 aaKnown RBP19.36■□□□□ 0.69
VPS13B-201ENST00000355155 TRIM9Q9C026 710 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 NT5C3AQ9H0P0 336 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 RWDD2AQ9UIY3 292 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 LOXHD1Q8IVV2 1947 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 PVALEFA0A1B0GWK0 134 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 CD44P16070 742 aaKnown RBP19.36■□□□□ 0.69
VPS13B-201ENST00000355155 CDC25AP30304 524 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 CDKAL1Q5VV42 579 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 MCF2L2Q86YR7 1114 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 GIMAP8Q8ND71 665 aaPredicted RBP19.36■□□□□ 0.69
VPS13B-201ENST00000355155 PCDHA12Q9UN75 941 aa19.36■□□□□ 0.69
VPS13B-201ENST00000355155 MUTP22033 750 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 KRT79Q5XKE5 535 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 RAD54LQ92698 747 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 FBXO28Q9NVF7 368 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 AFG3L2Q9Y4W6 797 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 CBFA2T2O43439 604 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 USP2O75604 605 aaPredicted RBP19.35■□□□□ 0.69
VPS13B-201ENST00000355155 BCRP11274 1271 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 EHHADHQ08426 723 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 USP50Q70EL3 339 aaPredicted RBP19.35■□□□□ 0.69
VPS13B-201ENST00000355155 PICK1Q9NRD5 415 aa19.35■□□□□ 0.69
VPS13B-201ENST00000355155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.35■□□□□ 0.69
VPS13B-201ENST00000355155 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
VPS13B-201ENST00000355155 FANCCQ00597 558 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 WRNIP1Q96S55 665 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 VAV3Q9UKW4 847 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 FAM86B1E9PN63 330 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 FAM86B2P0C5J1 330 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 MTMR2Q13614 643 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 RNF181Q9P0P0 153 aa19.34■□□□□ 0.69
VPS13B-201ENST00000355155 ISM2Q6H9L7 571 aa19.33■□□□□ 0.69
VPS13B-201ENST00000355155 B3GNT9Q6UX72 402 aa19.33■□□□□ 0.69
VPS13B-201ENST00000355155 CCDC84Q86UT8 332 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms