RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ARHGAP25P42331 645 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ATP1A2P50993 1020 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 GOLGA8FQ08AF8 430 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 GOLGA8DPQ0D2H9 430 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 MAP7Q14244 749 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 MIS18BP1Q6P0N0 1132 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ANKRD36BP1Q96IX9 119 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 PPP1R16BQ96T49 567 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 AP5M1Q9H0R1 490 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 GPR108Q9NPR9 543 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 PPFIA4O75335 1185 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 CASP14P31944 242 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 TSNAXIP1Q2TAA8 658 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 CCDC68Q9H2F9 335 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 FOXP1Q9H334 677 aaPredicted RBP14.42□□□□□ -0.1
SCN8A-202ENST00000355133 EPN1Q9Y6I3 576 aaPredicted RBP14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ADGRL2O95490 1459 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 CARMIL3Q8ND23 1372 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ARHGAP42A6NI28 874 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 PPP2R5AQ15172 486 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 CC2D2BQ6DHV5 1058 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 PCDHA5Q9Y5H7 936 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 USP17L8P0C7I0 530 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 GNGT1P63211 74 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 RNF26Q9BY78 433 aaPredicted RBP14.42□□□□□ -0.1
SCN8A-202ENST00000355133 HAUS4Q9H6D7 363 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ARHGEF25Q86VW2 580 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 GRAMD1CQ8IYS0 662 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 METP08581 1390 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 CYP2D7A0A087X1C5 515 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 BMP3P12645 472 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 TMCO4Q5TGY1 634 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 PI4K2BQ8TCG2 481 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 TSC1Q92574 1164 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 GPR101Q96P66 508 aaPredicted RBP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 KANSL2Q9H9L4 492 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 PSMC2P35998 433 aaKnown RBP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 YWHAGP61981 247 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 SLC39A14Q15043 492 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 BRD3Q15059 726 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 RBBP5Q15291 538 aaKnown RBP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 MIPOL1Q8TD10 442 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 CEP170P1Q96L14 293 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 LAD1O00515 517 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 BBOX1O75936 387 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 USP17L2Q6R6M4 530 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 RETREG2Q8NC44 543 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 SRP68Q9UHB9 627 aaKnown RBP14.41□□□□□ -0.1
SCN8A-202ENST00000355133 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
SCN8A-202ENST00000355133 TCP1P17987 556 aaKnown RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 RXRBP28702 533 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 CCND2P30279 289 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 ZBTB33Q86T24 672 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 DCLK2Q8N568 766 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 ACCSQ96QU6 501 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 MAGEF1Q9HAY2 307 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 STAP2Q9UGK3 403 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 ESYT2A0FGR8 921 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 PPP2R5EQ16537 467 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 SUPT20HL1Q3ZLR7 823 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 MUM1L1Q5H9M0 696 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 RSRC2Q7L4I2 434 aaKnown RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 MYO1FO00160 1098 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 WDR46O15213 610 aaKnown RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 STAT2P52630 851 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 SNAP25P60880 206 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 CEP120Q8N960 986 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 FAM149B1Q96BN6 582 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 HOMER3Q9NSC5 361 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 TYW1Q9NV66 732 aaKnown RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 LRRN2O75325 713 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 UBE2SQ16763 222 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 NLRP10Q86W26 655 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 NSUN7Q8NE18 718 aaKnown RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 KLHL14Q9P2G3 628 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 PSDA5PKW4 1024 aaPredicted RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 SGK1O00141 431 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 PPP6R2O75170 966 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 MYCP01106 439 aaPredicted RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 ARPP19P56211 112 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 NLRP7Q8WX94 980 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 SMYD2Q9NRG4 433 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 ADD3Q9UEY8 706 aaKnown RBP14.4□□□□□ -0.1
SCN8A-202ENST00000355133 BAIAP2L1Q9UHR4 511 aa14.4□□□□□ -0.1
SCN8A-202ENST00000355133 GOLGA8SH3BPF8 625 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 XPOTO43592 962 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms