RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SSC5DA1L4H1 1573 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 H7C1D1 291 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 CCDC96Q2M329 555 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 ASPRV1Q53RT3 343 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 PIK3AP1Q6ZUJ8 805 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 RABGGTAQ92696 567 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 MTMR8Q96EF0 704 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 ARFGAP3Q9NP61 516 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 LZTFL1Q9NQ48 299 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 GGA3Q9NZ52 723 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 CALCOCO1Q9P1Z2 691 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 A0A087X0B3 334 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 AKR1B15C9JRZ8 316 aaPredicted RBP9.67□□□□□ -0.86
TRIM55-204ENST00000353317 CCDC175P0C221 793 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
TRIM55-204ENST00000353317 ERCC5P28715 1186 aaPredicted RBP9.67□□□□□ -0.86
TRIM55-204ENST00000353317 OAS2P29728 719 aaKnown RBP9.67□□□□□ -0.86
TRIM55-204ENST00000353317 SLC1A4P43007 532 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 HNRNPH2P55795 449 aaKnown RBP9.67□□□□□ -0.86
TRIM55-204ENST00000353317 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
TRIM55-204ENST00000353317 RAD9BQ6WBX8 426 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 BLIDQ8IZY5 108 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 FUT8Q9BYC5 575 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 ZSWIM4Q9H7M6 989 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 TMEM260Q9NX78 707 aa9.67□□□□□ -0.86
TRIM55-204ENST00000353317 MYH7BA7E2Y1 1941 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 CASP1P29466 404 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 RBL2Q08999 1139 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 ZNF174Q15697 407 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 NEK11Q8NG66 645 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 GOLGA1Q92805 767 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 ZKSCAN4Q969J2 545 aaPredicted RBP9.66□□□□□ -0.86
TRIM55-204ENST00000353317 RRP36Q96EU6 259 aaKnown RBP9.66□□□□□ -0.86
TRIM55-204ENST00000353317 EPSTI1Q96J88 318 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 PANX2Q96RD6 677 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 LZTS2Q9BRK4 669 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 ZMYND12Q9H0C1 365 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 ADGRG1Q9Y653 693 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 SMCO2A6NFE2 343 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 TXLNAP40222 546 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 AFMP43652 599 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 STX17P56962 302 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 IL17AQ16552 155 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 KLHL10Q6JEL2 608 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 IGSF22Q8N9C0 903 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 GMCL1P1Q8NEA9 526 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 CPLX3Q8WVH0 158 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 P2RX7Q99572 595 aaKnown RBP9.66□□□□□ -0.86
TRIM55-204ENST00000353317 SH3GLB2Q9NR46 395 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 TMX2Q9Y320 296 aa9.66□□□□□ -0.86
TRIM55-204ENST00000353317 XBP1P17861 261 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 PBX1P40424 430 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 NAPAP54920 295 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 CUL4BQ13620 913 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 QRICH1Q2TAL8 776 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 SMYD4Q8IYR2 804 aaPredicted RBP9.65□□□□□ -0.86
TRIM55-204ENST00000353317 FBXO28Q9NVF7 368 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 ADD3Q9UEY8 706 aaKnown RBP9.65□□□□□ -0.86
TRIM55-204ENST00000353317 CEP131Q9UPN4 1083 aa9.65□□□□□ -0.86
TRIM55-204ENST00000353317 TNNI2P48788 182 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.87
TRIM55-204ENST00000353317 PRKG1Q13976 671 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 LONRF2Q1L5Z9 754 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 FAM83BQ5T0W9 1011 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 GPATCH4Q5T3I0 446 aaKnown RBP9.65□□□□□ -0.87
TRIM55-204ENST00000353317 SPATA1Q5VX52 437 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 C4orf32Q8N8J7 132 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 GMCL1Q96IK5 515 aa9.65□□□□□ -0.87
TRIM55-204ENST00000353317 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.87
TRIM55-204ENST00000353317 PNMA6FA0A0J9YX94 578 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 A0A0U1RQG5 324 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-204ENST00000353317 CCDC151A5D8V7 595 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 POTECB2RU33 542 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 MMP14P50281 582 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 GYS2P54840 703 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 TNFAIP1Q13829 316 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 INF2Q27J81 1249 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 SRGAP1Q7Z6B7 1085 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 DCAF4Q8WV16 495 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 PAGE5Q96GU1 130 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 PUF60Q9UHX1 559 aaKnown RBP9.64□□□□□ -0.87
TRIM55-204ENST00000353317 DOCK1Q14185 1865 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 SYNRGQ9UMZ2 1314 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 ADM5C9JUS6 153 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 OPLAHO14841 1288 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 ZBTB5O15062 677 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 MFAP3LO75121 409 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 ABL1P00519 1130 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 TFRCP02786 760 aaKnown RBP9.64□□□□□ -0.87
TRIM55-204ENST00000353317 BMP3P12645 472 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 CASP14P31944 242 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 UBE2SQ16763 222 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 JAKMIP3Q5VZ66 844 aa9.64□□□□□ -0.87
TRIM55-204ENST00000353317 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms