RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 COL6A1P12109 1028 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 HOXA13P31271 388 aaPredicted RBP29.85■■■□□ 2.37
H2AFV-204ENST00000350771 AK2P54819 239 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 WWC2Q6AWC2 1192 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 PPP1R18Q6NYC8 613 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 CHRDL2Q6WN34 429 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 PXMP2Q9NR77 195 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 RBM27Q9P2N5 1060 aaKnown RBP29.85■■■□□ 2.37
H2AFV-204ENST00000350771 FRMPD4Q14CM0 1322 aa29.85■■■□□ 2.37
H2AFV-204ENST00000350771 MEIS2O14770 477 aa29.84■■■□□ 2.37
H2AFV-204ENST00000350771 PRPF3O43395 683 aaKnown RBP29.84■■■□□ 2.37
H2AFV-204ENST00000350771 DUSP11O75319 330 aaKnown RBP29.84■■■□□ 2.37
H2AFV-204ENST00000350771 PFKFB3Q16875 520 aaPredicted RBP29.84■■■□□ 2.37
H2AFV-204ENST00000350771 ANO1Q5XXA6 986 aa29.84■■■□□ 2.37
H2AFV-204ENST00000350771 FBXO16Q8IX29 292 aaPredicted RBP29.84■■■□□ 2.37
H2AFV-204ENST00000350771 DIS3LQ8TF46 1054 aaKnown RBP29.84■■■□□ 2.37
H2AFV-204ENST00000350771 C22orf23Q9BZE7 217 aa29.84■■■□□ 2.37
H2AFV-204ENST00000350771 NCOA5Q9HCD5 579 aaKnown RBP29.84■■■□□ 2.37
H2AFV-204ENST00000350771 TPCN1Q9ULQ1 816 aa29.84■■■□□ 2.37
H2AFV-204ENST00000350771 KIAA1217Q5T5P2 1943 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 DNM1LO00429 736 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 NKX3-2P78367 333 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 CCT2P78371 535 aaKnown RBP29.83■■■□□ 2.37
H2AFV-204ENST00000350771 PDE4DQ08499 809 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 TYW1BQ6NUM6 668 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 HEATR3Q7Z4Q2 680 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 ARRDC4Q8NCT1 418 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 GPKOWQ92917 476 aaPredicted RBP eCLIP29.83■■■□□ 2.37
H2AFV-204ENST00000350771 PDCD2LQ9BRP1 358 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 LARP6Q9BRS8 491 aaKnown RBP29.83■■■□□ 2.37
H2AFV-204ENST00000350771 RNF26Q9BY78 433 aaPredicted RBP29.83■■■□□ 2.37
H2AFV-204ENST00000350771 XPNPEP3Q9NQH7 507 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 BARHL2Q9NY43 387 aa29.83■■■□□ 2.37
H2AFV-204ENST00000350771 ADAMTS4O75173 837 aa29.82■■■□□ 2.36
H2AFV-204ENST00000350771 NEK4P51957 841 aa29.82■■■□□ 2.36
H2AFV-204ENST00000350771 PKN1Q16512 942 aa29.82■■■□□ 2.36
H2AFV-204ENST00000350771 IQSEC1Q6DN90 963 aa29.82■■■□□ 2.36
H2AFV-204ENST00000350771 LENG1Q96BZ8 264 aaPredicted RBP29.82■■■□□ 2.36
H2AFV-204ENST00000350771 UPF3AQ9H1J1 476 aaKnown RBP29.82■■■□□ 2.36
H2AFV-204ENST00000350771 PSTPIP2Q9H939 334 aa29.82■■■□□ 2.36
H2AFV-204ENST00000350771 PDGFCQ9NRA1 345 aa29.82■■■□□ 2.36
H2AFV-204ENST00000350771 GNEQ9Y223 722 aaKnown RBP29.82■■■□□ 2.36
H2AFV-204ENST00000350771 SYNRGQ9UMZ2 1314 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 STXBP3O00186 592 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 PFKFB2O60825 505 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 ADCYAP1R1P41586 468 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 FXR1P51114 621 aaKnown RBP eCLIP29.81■■■□□ 2.36
H2AFV-204ENST00000350771 LRRC41Q15345 812 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 ARHGEF16Q5VV41 709 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 EEPD1Q7L9B9 569 aa29.81■■■□□ 2.36
H2AFV-204ENST00000350771 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.8■■■□□ 2.36
H2AFV-204ENST00000350771 NR3C2P08235 984 aa29.8■■■□□ 2.36
H2AFV-204ENST00000350771 SCG2P13521 617 aa29.8■■■□□ 2.36
H2AFV-204ENST00000350771 EIF2AK2P19525 551 aaKnown RBP29.8■■■□□ 2.36
H2AFV-204ENST00000350771 TNFAIP2Q03169 654 aa29.8■■■□□ 2.36
H2AFV-204ENST00000350771 USP17L6PQ6QN14 398 aa29.8■■■□□ 2.36
H2AFV-204ENST00000350771 PHKBQ93100 1093 aa29.8■■■□□ 2.36
H2AFV-204ENST00000350771 C11orf49Q9H6J7 331 aa29.8■■■□□ 2.36
H2AFV-204ENST00000350771 CST5P28325 142 aaPredicted RBP29.79■■■□□ 2.36
H2AFV-204ENST00000350771 GJA9P57773 515 aa29.79■■■□□ 2.36
H2AFV-204ENST00000350771 STXBP2Q15833 593 aa29.79■■■□□ 2.36
H2AFV-204ENST00000350771 KLHDC9Q8NEP7 349 aa29.79■■■□□ 2.36
H2AFV-204ENST00000350771 CUL5Q93034 780 aa29.79■■■□□ 2.36
H2AFV-204ENST00000350771 Q9Y3F1 56 aa29.79■■■□□ 2.36
H2AFV-204ENST00000350771 PGK1P00558 417 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 SMPD1P17405 629 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 SCRN1Q12765 414 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 PGM5Q15124 567 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 DUSP28Q4G0W2 176 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 VSIG10LQ86VR7 867 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 FCHSD1Q86WN1 690 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 SCFD2Q8WU76 684 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 RIC8AQ9NPQ8 531 aa29.78■■■□□ 2.36
H2AFV-204ENST00000350771 ESYT2A0FGR8 921 aa29.77■■■□□ 2.36
H2AFV-204ENST00000350771 EIF3JO75822 258 aaKnown RBP29.77■■■□□ 2.36
H2AFV-204ENST00000350771 NAPAP54920 295 aa29.77■■■□□ 2.36
H2AFV-204ENST00000350771 STK3Q13188 491 aa29.77■■■□□ 2.36
H2AFV-204ENST00000350771 GJC2Q5T442 439 aaPredicted RBP29.77■■■□□ 2.36
H2AFV-204ENST00000350771 CCSAPQ6IQ19 270 aaPredicted RBP29.77■■■□□ 2.36
H2AFV-204ENST00000350771 RNF180Q86T96 592 aa29.77■■■□□ 2.36
H2AFV-204ENST00000350771 SMARCC2Q8TAQ2 1214 aa29.77■■■□□ 2.36
H2AFV-204ENST00000350771 SLKQ9H2G2 1235 aaPredicted RBP29.77■■■□□ 2.36
H2AFV-204ENST00000350771 CTAGE5O15320 804 aa29.76■■■□□ 2.35
H2AFV-204ENST00000350771 IL31RAQ8NI17 732 aa29.76■■■□□ 2.35
H2AFV-204ENST00000350771 SLC26A6Q9BXS9 759 aa29.76■■■□□ 2.35
H2AFV-204ENST00000350771 WDR11Q9BZH6 1224 aa29.76■■■□□ 2.35
H2AFV-204ENST00000350771 GLT8D2Q9H1C3 349 aa29.76■■■□□ 2.35
H2AFV-204ENST00000350771 UPF2Q9HAU5 1272 aaKnown RBP29.76■■■□□ 2.35
H2AFV-204ENST00000350771 PHF24Q9UPV7 400 aa29.76■■■□□ 2.35
H2AFV-204ENST00000350771 KBTBD13C9JR72 458 aa29.75■■■□□ 2.35
H2AFV-204ENST00000350771 CPLX1O14810 134 aa29.75■■■□□ 2.35
H2AFV-204ENST00000350771 TMEM63BQ5T3F8 832 aa29.75■■■□□ 2.35
H2AFV-204ENST00000350771 CCDC62Q6P9F0 684 aa29.75■■■□□ 2.35
H2AFV-204ENST00000350771 CPLX2Q6PUV4 134 aaKnown RBP29.75■■■□□ 2.35
H2AFV-204ENST00000350771 DNAH12Q6ZR08 3092 aa29.75■■■□□ 2.35
H2AFV-204ENST00000350771 TSEN34Q9BSV6 310 aaKnown RBP29.75■■■□□ 2.35
H2AFV-204ENST00000350771 AKAP17AQ02040 695 aaKnown RBP29.74■■■□□ 2.35
H2AFV-204ENST00000350771 ME3Q16798 604 aa29.74■■■□□ 2.35
H2AFV-204ENST00000350771 TLK2Q86UE8 772 aa29.74■■■□□ 2.35
H2AFV-204ENST00000350771 TRIM22Q8IYM9 498 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms