RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNRF3Q9ULT6 936 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 MAPK8IP1Q9UQF2 711 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.72■□□□□ 0.59
SAMM50-201ENST00000350028 CYP3A7-CYP3A51PA0A087WV96 503 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 PVALEFA0A1B0GWK0 134 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 N4BP3O15049 544 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 CYP3A7P24462 503 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 MMP14P50281 582 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 ADKP55263 362 aaKnown RBP18.71■□□□□ 0.59
SAMM50-201ENST00000350028 TRAF1Q13077 416 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 TMEM119Q4V9L6 283 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 CNNM4Q6P4Q7 775 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 SNX29Q8TEQ0 813 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 HAS1Q92839 578 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 MBOAT7Q96N66 472 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 ANO3Q9BYT9 981 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 CLRN2A0PK11 232 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 BICDL2A1A5D9 508 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L15C9J2P7 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L13C9JLJ4 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L11C9JVI0 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L18D6R9N7 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L22D6RA61 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L17D6RBQ6 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L19D6RCP7 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L20D6RJB6 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 COBLO75128 1261 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 FOSP01100 380 aaPredicted RBP18.71■□□□□ 0.59
SAMM50-201ENST00000350028 CCNE1P24864 410 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 EEF1GP26641 437 aaKnown RBP18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L24Q0WX57 530 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 IKQ13123 557 aaPredicted RBP18.71■□□□□ 0.59
SAMM50-201ENST00000350028 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 TEX2Q8IWB9 1127 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 LARP4BQ92615 738 aaKnown RBP18.71■□□□□ 0.59
SAMM50-201ENST00000350028 RAD54LQ92698 747 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 CCDC51Q96ER9 411 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 NAA15Q9BXJ9 866 aaKnown RBP18.71■□□□□ 0.59
SAMM50-201ENST00000350028 PCDHA12Q9UN75 941 aa18.71■□□□□ 0.59
SAMM50-201ENST00000350028 CTIFO43310 598 aaKnown RBP18.7■□□□□ 0.58
SAMM50-201ENST00000350028 TBC1D12O60347 775 aa18.7■□□□□ 0.58
SAMM50-201ENST00000350028 TPM1P09493 284 aa18.7■□□□□ 0.58
SAMM50-201ENST00000350028 TTI2Q6NXR4 508 aa18.7■□□□□ 0.58
SAMM50-201ENST00000350028 UNC13DQ70J99 1090 aa18.7■□□□□ 0.58
SAMM50-201ENST00000350028 P2RX5Q93086 422 aa18.7■□□□□ 0.58
SAMM50-201ENST00000350028 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
SAMM50-201ENST00000350028 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
SAMM50-201ENST00000350028 BRCA1P38398 1863 aaKnown RBP18.7■□□□□ 0.58
SAMM50-201ENST00000350028 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 GOLGA6L9A6NEM1 432 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 POTEMA6NI47 508 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 MEIS2O14770 477 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 CCT6AP40227 531 aaKnown RBP18.69■□□□□ 0.58
SAMM50-201ENST00000350028 RBL2Q08999 1139 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 TRIM14Q14142 442 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 MCM6Q14566 821 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 HYIQ5T013 277 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 VPS16Q9H269 839 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 TAB2Q9NYJ8 693 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 MAGEC2Q9UBF1 373 aaPredicted RBP18.69■□□□□ 0.58
SAMM50-201ENST00000350028 TMX2Q9Y320 296 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 COL4A5P29400 1685 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 TRIM49BA6NDI0 452 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 MYMKA6NI61 221 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 FAM83AQ86UY5 434 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 IRF2BP1Q8IU81 584 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 CNGA4Q8IV77 575 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 REXO1L1PQ8IX06 675 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 SLFN12Q8IYM2 578 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 SRRTQ9BXP5 876 aaKnown RBP18.69■□□□□ 0.58
SAMM50-201ENST00000350028 NT5C3AQ9H0P0 336 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 GOPCQ9HD26 462 aa18.69■□□□□ 0.58
SAMM50-201ENST00000350028 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
SAMM50-201ENST00000350028 KDM3AQ9Y4C1 1321 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 PMS1P54277 932 aaKnown RBP18.68■□□□□ 0.58
SAMM50-201ENST00000350028 TGFB2P61812 414 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 STK4Q13043 487 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 SYCP1Q15431 976 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 FAM114A1Q8IWE2 563 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 CRYGNQ8WXF5 182 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 MAP7D2Q96T17 732 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 SPON1Q9HCB6 807 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 KCNMB3Q9NPA1 279 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 PRR12Q9ULL5 1215 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 PPP2R2CQ9Y2T4 447 aa18.68■□□□□ 0.58
SAMM50-201ENST00000350028 TBX3O15119 743 aa18.67■□□□□ 0.58
SAMM50-201ENST00000350028 MFAP3LO75121 409 aa18.67■□□□□ 0.58
SAMM50-201ENST00000350028 ARHGAP4P98171 946 aa18.67■□□□□ 0.58
SAMM50-201ENST00000350028 PSMD2Q13200 908 aa18.67■□□□□ 0.58
SAMM50-201ENST00000350028 MTERF4Q7Z6M4 381 aaKnown RBP18.67■□□□□ 0.58
SAMM50-201ENST00000350028 DUSP9Q99956 384 aaKnown RBP18.67■□□□□ 0.58
SAMM50-201ENST00000350028 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
SAMM50-201ENST00000350028 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
SAMM50-201ENST00000350028 SOCS7O14512 581 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 SNAP25P60880 206 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 ETF1P62495 437 aaKnown RBP18.66■□□□□ 0.58
SAMM50-201ENST00000350028 RBM10P98175 930 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms