RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 CTCFP49711 727 aaPredicted RBP16.56■□□□□ 0.24
COG3-201ENST00000349995 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 TRAPPC3LQ5T215 181 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
COG3-201ENST00000349995 GNAT1P11488 350 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 HIBADHP31937 336 aaKnown RBP16.56■□□□□ 0.24
COG3-201ENST00000349995 CRKLP46109 303 aaKnown RBP16.56■□□□□ 0.24
COG3-201ENST00000349995 ZBTB17Q13105 803 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 KCNB1Q14721 858 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 SEPT2Q15019 361 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 DTHD1Q6ZMT9 781 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 NLRP10Q86W26 655 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 NOD2Q9HC29 1040 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 COL3A1P02461 1466 aaPredicted RBP16.56■□□□□ 0.24
COG3-201ENST00000349995 ATP10DQ9P241 1426 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 H7C1W4 665 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 ENOX1Q8TC92 643 aaKnown RBP16.56■□□□□ 0.24
COG3-201ENST00000349995 TEKT4Q8WW24 435 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 VIPAS39Q9H9C1 493 aa16.56■□□□□ 0.24
COG3-201ENST00000349995 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
COG3-201ENST00000349995 FTCDO95954 541 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 CDC25CP30307 473 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 HDLBPQ00341 1268 aaKnown RBP16.55■□□□□ 0.24
COG3-201ENST00000349995 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
COG3-201ENST00000349995 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 PAPOLBQ9NRJ5 636 aaKnown RBP16.55■□□□□ 0.24
COG3-201ENST00000349995 MAN1B1Q9UKM7 699 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 MAST3O60307 1309 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 STXBP3O00186 592 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 ZRANB2O95218 330 aaKnown RBP eCLIP16.55■□□□□ 0.24
COG3-201ENST00000349995 DNM2P50570 870 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 B4GALNT2Q8NHY0 566 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 TBC1D5Q92609 795 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 DDX12PQ92771 950 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 CYTH2Q99418 400 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 SYNCQ9H7C4 482 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
COG3-201ENST00000349995 HSPA1LP34931 641 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 HSP90AA5PQ58FG0 334 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 ZMYM1Q5SVZ6 1142 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
COG3-201ENST00000349995 CCDC110Q8TBZ0 833 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 HEATR3Q7Z4Q2 680 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 TRIML1Q8N9V2 468 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 GDAP1Q8TB36 358 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
COG3-201ENST00000349995 SPATA31D1Q6ZQQ2 1576 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 TEX33O43247 280 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 MAP3K7O43318 606 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 CHGBP05060 677 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 HNRNPLLQ8WVV9 542 aaKnown RBP16.54■□□□□ 0.24
COG3-201ENST00000349995 CUL5Q93034 780 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 NEURL4Q96JN8 1562 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 BTBD18B2RXH4 712 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 MDH1P40925 334 aaKnown RBP16.54■□□□□ 0.24
COG3-201ENST00000349995 SMTNP53814 917 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 ETNK1Q9HBU6 452 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 TROVE2P10155 538 aaKnown RBP eCLIP16.54■□□□□ 0.24
COG3-201ENST00000349995 PLTPP55058 493 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 CENPKQ9BS16 269 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 EHD4Q9H223 541 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 IL25Q9H293 177 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 DLGAP2Q9P1A6 1054 aa16.54■□□□□ 0.24
COG3-201ENST00000349995 PDIA3P30101 505 aaKnown RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 KCNJ6P48051 423 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 ACBD5Q5T8D3 534 aaPredicted RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 TMEM154Q6P9G4 183 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 ARMCX6Q7L4S7 300 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 OTUD6AQ7L8S5 288 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 ATP6V1G3Q96LB4 118 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 V9GY48 417 aaPredicted RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 SPOPO43791 374 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 SEMA3FQ13275 785 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 ASIC2Q16515 512 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 INF2Q27J81 1249 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 DCAF17Q5H9S7 520 aaPredicted RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 FAM47EQ6ZV65 393 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 FUCA2Q9BTY2 467 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 MLXIPLQ9NP71 852 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 CTTNBP2NLQ9P2B4 639 aa16.53■□□□□ 0.24
COG3-201ENST00000349995 RPAP1Q9BWH6 1393 aaPredicted RBP16.53■□□□□ 0.24
COG3-201ENST00000349995 ANP32DO95626 131 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms