RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ATP6V1G2O95670 118 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 PAEPP09466 180 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 SLMAPQ14BN4 828 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 E2F5Q15329 346 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 PKN1Q16512 942 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 SPRED3Q2MJR0 410 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 TTC38Q5R3I4 469 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 CDCA2Q69YH5 1023 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 CATIPQ7Z7H3 387 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 EIF1ADQ8N9N8 165 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 ALS2CR12Q96Q35 445 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 PRDM11Q9NQV5 511 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 SPATS2LQ9NUQ6 558 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 SLC12A6Q9UHW9 1150 aa11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-202ENST00000348749 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 FGRP09769 529 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 FAM153BP0C7A2 387 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 HSPA9P38646 679 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 CARSP49589 748 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 ADCY2Q08462 1091 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 SPA17Q15506 151 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 FAM153CQ494X1 144 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 PDXDC2PQ6P474 469 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 NFRKBQ6P4R8 1299 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 DNAJC10Q8IXB1 793 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 CACNA2D3Q8IZS8 1091 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 SEC16BQ96JE7 1060 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 PLCB1Q9NQ66 1216 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 DUOX1Q9NRD9 1551 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 RBM12Q9NTZ6 932 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 LRWD1Q9UFC0 647 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 FAM153AQ9UHL3 310 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 NFU1Q9UMS0 254 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 NHSL1Q5SYE7 1610 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 TNKSO95271 1327 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 ITGB4P16144 1822 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 LAMB2P55268 1798 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 ZNF263O14978 683 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 LCA5LO95447 670 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 SSBP05455 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 GLI1P08151 1106 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 LONP1P36776 959 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 ELF3P78545 371 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 RIPK1Q13546 671 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 BYSLQ13895 437 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 LCORLQ8N3X6 602 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 CCHCR1Q8TD31 782 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 CCT6BQ92526 530 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 CUL5Q93034 780 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 TATDN2Q93075 761 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 ZSCAN10Q96SZ4 725 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 NOD2Q9HC29 1040 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 PPANQ9NQ55 473 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 HOMER3Q9NSC5 361 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 AGPAT5Q9NUQ2 364 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 EXOC1Q9NV70 894 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
CHRNA1-202ENST00000348749 GOLGA6L10A6NI86 522 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 HEXIM1O94992 359 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 IBSPP21815 317 aaPredicted RBP11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 HNRNPH3P31942 346 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 GCKP35557 465 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 PPP1R2P41236 205 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 PRCPP42785 496 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 BIRC3Q13489 604 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 KCNB1Q14721 858 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 HLFQ16534 295 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 CCDC96Q2M329 555 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 ZNF34Q8IZ26 560 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 ADSSL1Q8N142 457 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 BRIP1Q9BX63 1249 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 BLZF1Q9H2G9 400 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 POLD4Q9HCU8 107 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 PLAAQ9Y263 795 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 ABCA3Q99758 1704 aa11.4□□□□□ -0.58
CHRNA1-202ENST00000348749 FRMD3A2A2Y4 597 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 OPLAHO14841 1288 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 PPP1R12BO60237 982 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MOCS3O95396 460 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 RPN1P04843 607 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 GSTA1P08263 222 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 MRPS25P82663 173 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 QPCTQ16769 361 aa11.39□□□□□ -0.59
CHRNA1-202ENST00000348749 CFAP221Q4G0U5 840 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms