RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ARHGAP4P98171 946 aa30.83■■■□□ 2.53
SSBP4-202ENST00000348495 PTPAQ15257 358 aa30.83■■■□□ 2.53
SSBP4-202ENST00000348495 FIBPO43427 364 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 YEATS4O95619 227 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 C1QTNF8P60827 252 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 LETM2Q2VYF4 491 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 LINC00301Q8NCQ3 95 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 LEO1Q8WVC0 666 aaPredicted RBP30.82■■■□□ 2.52
SSBP4-202ENST00000348495 PURBQ96QR8 312 aaKnown RBP30.82■■■□□ 2.52
SSBP4-202ENST00000348495 EHMT1Q9H9B1 1298 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 GDPD2Q9HCC8 539 aa30.82■■■□□ 2.52
SSBP4-202ENST00000348495 CYP3A4P08684 503 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 ZNF174Q15697 407 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 TMEM87AQ8NBN3 555 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 CFHR5Q9BXR6 569 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 SLC39A14Q15043 492 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 PPP4R3AQ6IN85 833 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 MMP19Q99542 508 aa30.81■■■□□ 2.52
SSBP4-202ENST00000348495 DNAJC25-GNG10A0A024R161 153 aa30.8■■■□□ 2.52
SSBP4-202ENST00000348495 FCER1AP12319 257 aa30.8■■■□□ 2.52
SSBP4-202ENST00000348495 MAPK4P31152 587 aa30.8■■■□□ 2.52
SSBP4-202ENST00000348495 ORC2Q13416 577 aaPredicted RBP30.8■■■□□ 2.52
SSBP4-202ENST00000348495 FAM133AQ8N9E0 248 aa30.8■■■□□ 2.52
SSBP4-202ENST00000348495 RMDN3Q96TC7 470 aa30.8■■■□□ 2.52
SSBP4-202ENST00000348495 PXMP2Q9NR77 195 aa30.8■■■□□ 2.52
SSBP4-202ENST00000348495 MORC2Q9Y6X9 1032 aaPredicted RBP30.8■■■□□ 2.52
SSBP4-202ENST00000348495 CYP3A7-CYP3A51PA0A087WV96 503 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 CYP3A7P24462 503 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 CIITAP33076 1130 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 MCM7P33993 719 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 KCTD2Q14681 263 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 WDR78Q5VTH9 848 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 MOXD1Q6UVY6 613 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 ABRAQ8N0Z2 381 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 SPATA32Q96LK8 384 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 MBOAT7Q96N66 472 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 ELP1O95163 1332 aa30.79■■■□□ 2.52
SSBP4-202ENST00000348495 CCNT1O60563 726 aaKnown RBP30.78■■■□□ 2.52
SSBP4-202ENST00000348495 STRNO43815 780 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 TDP2O95551 362 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 BMP15O95972 392 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 GCFC2P16383 781 aaKnown RBP30.78■■■□□ 2.52
SSBP4-202ENST00000348495 MCM4P33991 863 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 CNTN2Q02246 1040 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 STK38Q15208 465 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 GPR142Q7Z601 462 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 CCAR1Q8IX12 1150 aaKnown RBP30.78■■■□□ 2.52
SSBP4-202ENST00000348495 C4orf32Q8N8J7 132 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 NAP1L4Q99733 375 aaKnown RBP30.78■■■□□ 2.52
SSBP4-202ENST00000348495 PDCD2LQ9BRP1 358 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 CEP131Q9UPN4 1083 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 PLXNB2O15031 1838 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 ASTN1O14525 1302 aa30.78■■■□□ 2.52
SSBP4-202ENST00000348495 POTEB2H3BUK9 544 aa30.77■■■□□ 2.52
SSBP4-202ENST00000348495 UBXN2AP68543 259 aa30.77■■■□□ 2.52
SSBP4-202ENST00000348495 DNERQ8NFT8 737 aa30.77■■■□□ 2.52
SSBP4-202ENST00000348495 IL31RAQ8NI17 732 aa30.77■■■□□ 2.52
SSBP4-202ENST00000348495 NSUN6Q8TEA1 469 aaKnown RBP30.77■■■□□ 2.52
SSBP4-202ENST00000348495 EIF2AK2P19525 551 aaKnown RBP30.76■■■□□ 2.52
SSBP4-202ENST00000348495 PGM5Q15124 567 aa30.76■■■□□ 2.52
SSBP4-202ENST00000348495 ARHGEF16Q5VV41 709 aa30.76■■■□□ 2.52
SSBP4-202ENST00000348495 PCNX4Q63HM2 1172 aa30.76■■■□□ 2.52
SSBP4-202ENST00000348495 KCNG4Q8TDN1 519 aa30.76■■■□□ 2.52
SSBP4-202ENST00000348495 RNF186Q9NXI6 227 aa30.76■■■□□ 2.52
SSBP4-202ENST00000348495 SPTLC2O15270 562 aa30.76■■■□□ 2.51
SSBP4-202ENST00000348495 ATP2C1P98194 919 aaPredicted RBP30.76■■■□□ 2.51
SSBP4-202ENST00000348495 PTGDRQ13258 359 aa30.76■■■□□ 2.51
SSBP4-202ENST00000348495 PLEKHH3Q7Z736 793 aa30.76■■■□□ 2.51
SSBP4-202ENST00000348495 ZNFX1Q9P2E3 1918 aaKnown RBP30.75■■■□□ 2.51
SSBP4-202ENST00000348495 SOWAHBA6NEL2 793 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 FAM86B1E9PN63 330 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 SLC37A4O43826 429 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 PGK2P07205 417 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 FAM86B2P0C5J1 330 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 PTPREP23469 700 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 GRB14Q14449 540 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 CSPP1Q1MSJ5 1256 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 FGD4Q96M96 766 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 IVNS1ABPQ9Y6Y0 642 aa30.75■■■□□ 2.51
SSBP4-202ENST00000348495 PPP6R2O75170 966 aa30.74■■■□□ 2.51
SSBP4-202ENST00000348495 LENG9Q96B70 501 aa30.74■■■□□ 2.51
SSBP4-202ENST00000348495 MRVI1Q9Y6F6 885 aa30.74■■■□□ 2.51
SSBP4-202ENST00000348495 ZNF236Q9UL36 1845 aa30.74■■■□□ 2.51
SSBP4-202ENST00000348495 Q4G0T1 1027 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 XRRA1Q6P2D8 792 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 TMEM60Q9H2L4 133 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 DDX25Q9UHL0 483 aaKnown RBP30.73■■■□□ 2.51
SSBP4-202ENST00000348495 IGLV3-22A0A075B6J6 115 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 GOLGA6L22H0YM25 854 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 NEMFO60524 1076 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 TBC1D8O95759 1140 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 ADORA2AP29274 412 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 MRPS9P82933 396 aaKnown RBP30.73■■■□□ 2.51
SSBP4-202ENST00000348495 VSIG10LQ86VR7 867 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 IWS1Q96ST2 819 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 LMBRD1Q9NUN5 540 aa30.73■■■□□ 2.51
SSBP4-202ENST00000348495 ADD3Q9UEY8 706 aaKnown RBP30.73■■■□□ 2.51
SSBP4-202ENST00000348495 LAD1O00515 517 aa30.72■■■□□ 2.51
SSBP4-202ENST00000348495 PRPF40AO75400 957 aaKnown RBP30.72■■■□□ 2.51
SSBP4-202ENST00000348495 TRPA1O75762 1119 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms