RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 H7C0C1 242 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 ATP5OP48047 213 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 ESRRGP62508 458 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 INSRP06213 1382 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 SLITRK6Q9H5Y7 841 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 ZNF18P17022 549 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 CROCCP2Q86T23 111 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
TRAF3-201ENST00000347662 IFNA8P32881 189 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 HERC4Q5GLZ8 1057 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-201ENST00000347662 TAGAPQ8N103 731 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-201ENST00000347662 MLH3Q9UHC1 1453 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
TRAF3-201ENST00000347662 THAP12O43422 761 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 SRGAP2BP0DMP2 458 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAF3-201ENST00000347662 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 RAB17Q9H0T7 212 aa12.84□□□□□ -0.35
TRAF3-201ENST00000347662 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 GOLGA8QA0A0J9YX86 632 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 GOLGA8OA6NCC3 632 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 GOLGA8NF8WBI6 632 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 FLOT1O75955 427 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 CYP2J2P51589 502 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 TAF11Q15544 211 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 NLRX1Q86UT6 975 aa12.83□□□□□ -0.35
TRAF3-201ENST00000347662 SPATS2LQ9NUQ6 558 aaKnown RBP12.83□□□□□ -0.35
TRAF3-201ENST00000347662 PTPREP23469 700 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 BTDP43251 543 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 KCNA1Q09470 495 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 TEX12Q9BXU0 123 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 DEXIO95424 95 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 LIG4P49917 911 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 EPHB1P54762 984 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 YWHAHQ04917 246 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-201ENST00000347662 CALCRLQ16602 461 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAF3-201ENST00000347662 NRBF2Q96F24 287 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 SRPK1Q96SB4 655 aaKnown RBP12.83□□□□□ -0.36
TRAF3-201ENST00000347662 AS3MTQ9HBK9 375 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 KDM6BO15054 1643 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 DACH2Q96NX9 599 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 KLHL30Q0D2K2 578 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 CDKL2Q92772 493 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 TTC25Q96NG3 672 aa12.83□□□□□ -0.36
TRAF3-201ENST00000347662 UBXN8O00124 270 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 TLR3O15455 904 aaKnown RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 TEX9Q8N6V9 391 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 ZSCAN9O15535 394 aaPredicted RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 MTMR3Q13615 1198 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 DALRD3Q5D0E6 543 aaKnown RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 SUGCTQ9HAC7 445 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 C21orf2O43822 256 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 VPS54Q9P1Q0 977 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 SYNRGQ9UMZ2 1314 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 PDE1BQ01064 536 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 PIGBQ92521 554 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 AMFRQ9UKV5 643 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 KCNJ14Q9UNX9 436 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 E9PMD0 336 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 LMNAP02545 664 aaKnown RBP12.82□□□□□ -0.36
TRAF3-201ENST00000347662 PHKA1P46020 1223 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 ADCY7P51828 1080 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 PAK2Q13177 524 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 ZBTB8OSQ8IWT0 167 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 SFMBT2Q5VUG0 894 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 CHURC1Q8WUH1 139 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 RAD50Q92878 1312 aa12.82□□□□□ -0.36
TRAF3-201ENST00000347662 POLR2DO15514 142 aaKnown RBP12.81□□□□□ -0.36
TRAF3-201ENST00000347662 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 GOLGA8HP0CJ92 632 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 SCINQ9Y6U3 715 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 SGK1O00141 431 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 TUBBP07437 444 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 ADORA1P30542 326 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 UHMK1Q8TAS1 419 aaKnown RBP12.81□□□□□ -0.36
TRAF3-201ENST00000347662 POC1B-GALNT4F8VUJ3 575 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 CLTAP09496 248 aa12.81□□□□□ -0.36
TRAF3-201ENST00000347662 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms