RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 HSP90AA1P07900 732 aaKnown RBP5.95□□□□□ -1.46
VCAM1-202ENST00000347652 FAM200BP0CF97 657 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 PLCD1P51178 756 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 PPARAQ07869 468 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 DEFB115Q30KQ5 88 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 SPDYE1Q8NFV5 336 aaPredicted RBP5.95□□□□□ -1.46
VCAM1-202ENST00000347652 NIF3L1Q9GZT8 377 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 DHX36Q9H2U1 1008 aaKnown RBP5.95□□□□□ -1.46
VCAM1-202ENST00000347652 DNAAF2Q9NVR5 837 aaKnown RBP5.95□□□□□ -1.46
VCAM1-202ENST00000347652 ANGEL1Q9UNK9 670 aaKnown RBP5.95□□□□□ -1.46
VCAM1-202ENST00000347652 PCDHB9Q9Y5E1 797 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 PCDHGA10Q9Y5H3 936 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 TACC3Q9Y6A5 838 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 TAF6LQ9Y6J9 622 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 HTTP42858 3142 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 BRCA2P51587 3418 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 ATRNL1Q5VV63 1379 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 LAMA4Q16363 1823 aa5.95□□□□□ -1.46
VCAM1-202ENST00000347652 RASSF10A6NK89 507 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 E7EWF7 191 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 ZBTB24O43167 697 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 USP2O75604 605 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 VARSP26640 1264 aaKnown RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 HAND2P61296 217 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 TTC6Q86TZ1 520 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 ZNF513Q8N8E2 541 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 TSEN2Q8NCE0 465 aaKnown RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 CAPNS2Q96L46 248 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 KIF2CQ99661 725 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 KMT5AQ9NQR1 393 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 POLG2Q9UHN1 485 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 NOD1Q9Y239 953 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 PCDHGB3Q9Y5G1 929 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 ROBO3Q96MS0 1386 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 LAMB1P07942 1786 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 PAPPA2Q9BXP8 1791 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 SIPA1L1O43166 1804 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 MYH1P12882 1939 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 BAZ2AQ9UIF9 1905 aaKnown RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 FAM155AB1AL88 458 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 RHOBTB3O94955 611 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 ZKSCAN1P17029 563 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 GABPAQ06546 454 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 TNFAIP1Q13829 316 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 SHROOM1Q2M3G4 852 aaPredicted RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 STOX1Q6ZVD7 989 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 ATCAYQ86WG3 371 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 TBC1D10CQ8IV04 446 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 C2orf69Q8N8R5 385 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 TEX19Q8NA77 164 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 HELQQ8TDG4 1101 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 PARD3BQ8TEW8 1205 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 FEZ1Q99689 392 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 EHD4Q9H223 541 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 NGRNQ9NPE2 291 aaKnown RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 TMEM260Q9NX78 707 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 RABGAP1Q9Y3P9 1069 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 IPPQ9Y573 584 aa5.94□□□□□ -1.46
VCAM1-202ENST00000347652 WDR33Q9C0J8 1336 aaKnown RBP5.94□□□□□ -1.46
VCAM1-202ENST00000347652 EPHB1P54762 984 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 PLCB3Q01970 1234 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 MAP3K10Q02779 954 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 KRT32Q14532 448 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ADCK5Q3MIX3 580 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 FAM26DQ5JW98 314 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 AKNAD1Q5T1N1 836 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 C16orf86Q6ZW13 317 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 HS2ST1Q7LGA3 356 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ZKSCAN4Q969J2 545 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 DYNLL2Q96FJ2 89 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 HINFPQ9BQA5 517 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CD248Q9HCU0 757 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 INCENPQ9NQS7 918 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 PI4KBQ9UBF8 816 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 FZD6O60353 706 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 F2P00734 622 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 HLA-DOAP06340 250 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 SLC3A2P08195 630 aaKnown RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 PCP11498 1178 aaKnown RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 TNFAIP3P21580 790 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 INPP5BP32019 993 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CTHP32929 405 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 GJA5P36382 358 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ZNF157P51786 506 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 SEPT6Q14141 434 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CCDC92Q53HC0 331 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 MFSD6Q6ZSS7 791 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 LHFPL2Q6ZUX7 228 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 THNSL2Q86YJ6 484 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 RELL1Q8IUW5 271 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 FOXP4Q8IVH2 680 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ANAPC16Q96DE5 110 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 TM6SF1Q9BZW5 370 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 RNF41Q9H4P4 317 aaPredicted RBP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 CXorf56Q9H5V9 222 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
VCAM1-202ENST00000347652 NEDD4P46934 1319 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 ORC4O43929 436 aa5.93□□□□□ -1.46
VCAM1-202ENST00000347652 TCEA3O75764 348 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms