RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 POTEMA6NI47 508 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 SYF2O95926 243 aaKnown RBP16.21■□□□□ 0.19
SMTN-202ENST00000347557 TUBBP07437 444 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 FAM182BQ5T319 152 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 PAPD7Q5XG87 772 aaKnown RBP16.21■□□□□ 0.19
SMTN-202ENST00000347557 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
SMTN-202ENST00000347557 SV2BQ7L1I2 683 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 SRLQ86TD4 932 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
SMTN-202ENST00000347557 ZHX3Q9H4I2 956 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 MED4Q9NPJ6 270 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 FAM170AA1A519 330 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 BAG3O95817 575 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 IVLP07476 585 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 AMPD3Q01432 767 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 LRRC31Q6UY01 552 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 KIAA0895Q8NCT3 520 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 GLIS3Q8NEA6 775 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 ANKRD2Q9GZV1 360 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 PCDHA13Q9Y5I0 950 aa16.21■□□□□ 0.18
SMTN-202ENST00000347557 BCORQ6W2J9 1755 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 EIF3CLB5ME19 914 aaKnown RBP16.2■□□□□ 0.18
SMTN-202ENST00000347557 GNPATO15228 680 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 KIF11P52732 1056 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 VAV2P52735 878 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 MIIPQ5JXC2 388 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 CLEC10AQ8IUN9 316 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 NOC3LQ8WTT2 800 aaKnown RBP16.2■□□□□ 0.18
SMTN-202ENST00000347557 EIF3CQ99613 913 aaKnown RBP16.2■□□□□ 0.18
SMTN-202ENST00000347557 NCAPGQ9BPX3 1015 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 DMGDHQ9UI17 866 aaKnown RBP16.2■□□□□ 0.18
SMTN-202ENST00000347557 LRP5O75197 1615 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 GOLGA6BA6NDN3 693 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 MCM3P25205 808 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 TNNI2P48788 182 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 RASSF7Q02833 373 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 PTPROQ16827 1216 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 KCTD19Q17RG1 926 aaPredicted RBP16.2■□□□□ 0.18
SMTN-202ENST00000347557 CNNM4Q6P4Q7 775 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 NDST4Q9H3R1 872 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
SMTN-202ENST00000347557 LRRC53A6NM62 1247 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 MAGEA1P43355 309 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 KRT25Q7Z3Z0 450 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 MYMKA6NI61 221 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 RASA1P20936 1047 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
SMTN-202ENST00000347557 GFPT1Q06210 699 aaPredicted RBP16.19■□□□□ 0.18
SMTN-202ENST00000347557 MEA1Q16626 185 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
SMTN-202ENST00000347557 REXO1Q8N1G1 1221 aaKnown RBP16.19■□□□□ 0.18
SMTN-202ENST00000347557 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 USP17L5A8MUK1 530 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 M0R2N6 131 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 TDP2O95551 362 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 GNA11P29992 359 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 APBA1Q02410 837 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 PICALMQ13492 652 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 NFIXQ14938 502 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 CALCRLQ16602 461 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 CCDC170Q8IYT3 715 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 MS4A14Q96JA4 679 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMTN-202ENST00000347557 TTYH3Q9C0H2 523 aa16.19■□□□□ 0.18
SMTN-202ENST00000347557 FLT1P17948 1338 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 GOLGA6CA6NDK9 693 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 GOLGA6DP0CG33 693 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 VWA3BQ502W6 1294 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 TEX11Q8IYF3 940 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 LRRC47Q8N1G4 583 aaKnown RBP16.18■□□□□ 0.18
SMTN-202ENST00000347557 SNX29Q8TEQ0 813 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 EHD4Q9H223 541 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 GOLGA6AQ9NYA3 693 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 CACNA1SQ13698 1873 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 BTDP43251 543 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 CDK8P49336 464 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 FAM98CQ17RN3 349 aaKnown RBP16.18■□□□□ 0.18
SMTN-202ENST00000347557 CCDC40Q4G0X9 1142 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 IQCEQ6IPM2 695 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
SMTN-202ENST00000347557 PALM3A6NDB9 673 aaPredicted RBP16.17■□□□□ 0.18
SMTN-202ENST00000347557 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
SMTN-202ENST00000347557 EGFL6Q8IUX8 553 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 TRIM58Q8NG06 486 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 IFT81Q8WYA0 676 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 CEP95Q96GE4 821 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 MMTAG2Q9BU76 263 aaKnown RBP16.17■□□□□ 0.18
SMTN-202ENST00000347557 SNX12Q9UMY4 172 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 RETREG2Q8NC44 543 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 FAM76AQ8TAV0 307 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 ALS2CR12Q96Q35 445 aa16.17■□□□□ 0.18
SMTN-202ENST00000347557 ESYT3A0FGR9 886 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms