RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 SPATS2Q86XZ4 545 aaKnown RBP23.73■■□□□ 1.39
TRIM3-201ENST00000345851 RASSF8Q8NHQ8 419 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 MYCBPAPQ8TBZ2 947 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 VCPKMTQ9H867 229 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 THSD7AQ9UPZ6 1657 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 SRGNP10124 158 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 EEF1GP26641 437 aaKnown RBP23.73■■□□□ 1.39
TRIM3-201ENST00000345851 HPDP32754 393 aaPredicted RBP23.73■■□□□ 1.39
TRIM3-201ENST00000345851 STAT6P42226 847 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 ZBED6P86452 979 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 PPANQ9NQ55 473 aaKnown RBP23.73■■□□□ 1.39
TRIM3-201ENST00000345851 LRP5O75197 1615 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 BCORQ6W2J9 1755 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 CHD4Q14839 1912 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 A6NNZ2 444 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 USO1O60763 962 aaKnown RBP23.72■■□□□ 1.39
TRIM3-201ENST00000345851 GLI1P08151 1106 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 TUBB8Q3ZCM7 444 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 CEP85LQ5SZL2 805 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 CAVIN3Q969G5 261 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 SLC4A4Q9Y6R1 1079 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 NID2Q14112 1375 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.72■■□□□ 1.39
TRIM3-201ENST00000345851 NF2P35240 595 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 PAFAH1B1P43034 410 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 SLC40A1Q9NP59 571 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 HYOU1Q9Y4L1 999 aa23.72■■□□□ 1.39
TRIM3-201ENST00000345851 NKRFO15226 690 aaKnown RBP eCLIP23.71■■□□□ 1.39
TRIM3-201ENST00000345851 MAP3K12Q12852 859 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 TPTE2Q6XPS3 522 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 SH2D4AQ9H788 454 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 MCM8Q9UJA3 840 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 ODF2LQ9ULJ1 636 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 TNKSO95271 1327 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 MINDY4BA8MYZ0 360 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 GUCY2DQ02846 1103 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 ADGRA1Q86SQ6 560 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 LCORLQ8N3X6 602 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 CSGALNACT2Q8N6G5 542 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 TSGA10Q9BZW7 698 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 EPB41L5Q9HCM4 733 aa23.71■■□□□ 1.39
TRIM3-201ENST00000345851 BSDC1Q9NW68 430 aaPredicted RBP23.71■■□□□ 1.39
TRIM3-201ENST00000345851 CDR1P51861 262 aa23.7■■□□□ 1.39
TRIM3-201ENST00000345851 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.39
TRIM3-201ENST00000345851 NFIXQ14938 502 aa23.7■■□□□ 1.39
TRIM3-201ENST00000345851 PCDHA13Q9Y5I0 950 aa23.7■■□□□ 1.39
TRIM3-201ENST00000345851 PDHBP11177 359 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 SMTNP53814 917 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 C2CD5Q86YS7 1000 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 IQCKQ8N0W5 287 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 STAG1Q8WVM7 1258 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 CCDC114Q96M63 670 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 MTIF2P46199 727 aaKnown RBP23.7■■□□□ 1.38
TRIM3-201ENST00000345851 TMTC2Q8N394 836 aa23.7■■□□□ 1.38
TRIM3-201ENST00000345851 PSMA7O14818 248 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 ADAMTS3O15072 1205 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 TCP1P17987 556 aaKnown RBP23.69■■□□□ 1.38
TRIM3-201ENST00000345851 PREPLQ4J6C6 727 aaPredicted RBP23.69■■□□□ 1.38
TRIM3-201ENST00000345851 MAATS1Q7Z4T9 603 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 THAP9Q9H5L6 903 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 PP2D1A8MPX8 630 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 BUB1O43683 1085 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 RASSF9O75901 435 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 HEXIM1O94992 359 aaKnown RBP23.69■■□□□ 1.38
TRIM3-201ENST00000345851 ITIH3Q06033 890 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 TXNRD3Q86VQ6 643 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 SALL4Q9UJQ4 1053 aa23.69■■□□□ 1.38
TRIM3-201ENST00000345851 RTL9Q8NET4 1388 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 ATP2C2O75185 946 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 MDH1P40925 334 aaKnown RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 TRADDQ15628 312 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 NPY5RQ15761 445 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 YTHDF3Q7Z739 585 aaKnown RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 RPAINQ86UA6 219 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 GPR101Q96P66 508 aaPredicted RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 ALS2CR12Q96Q35 445 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 BACH1O14867 736 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 RNASE9P60153 205 aaKnown RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 SPRED3Q2MJR0 410 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 ZNF572Q7Z3I7 529 aaPredicted RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 IQCA1Q86XH1 822 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 FAM84BQ96KN1 310 aaPredicted RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 SCLT1Q96NL6 688 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 NUP58Q9BVL2 599 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 NYXQ9GZU5 481 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 VEZTQ9HBM0 779 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 ARHGAP20Q9P2F6 1191 aa23.68■■□□□ 1.38
TRIM3-201ENST00000345851 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.68■■□□□ 1.38
TRIM3-201ENST00000345851 C21orf2O43822 256 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 AKR1B10O60218 316 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 KIF11P52732 1056 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 IFT20Q8IY31 132 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 RUBCNQ92622 972 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 CNOT6LQ96LI5 555 aaKnown RBP23.67■■□□□ 1.38
TRIM3-201ENST00000345851 NOC4LQ9BVI4 516 aaKnown RBP23.67■■□□□ 1.38
TRIM3-201ENST00000345851 NACAP1Q9BZK3 213 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 CICQ96RK0 1608 aaPredicted RBP23.67■■□□□ 1.38
TRIM3-201ENST00000345851 NHSQ6T4R5 1651 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 FRMD3A2A2Y4 597 aa23.67■■□□□ 1.38
TRIM3-201ENST00000345851 ONECUT3O60422 494 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms