RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 PAK6Q9NQU5 681 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 SH2B1Q9NRF2 756 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 LOC102724159A0A0B4J2E5 919 aa23.92■■□□□ 1.42
SMARCB1-202ENST00000344921 GJB1P08034 283 aa23.92■■□□□ 1.42
SMARCB1-202ENST00000344921 ADCY7P51828 1080 aa23.92■■□□□ 1.42
SMARCB1-202ENST00000344921 PWP2Q15269 919 aaKnown RBP23.92■■□□□ 1.42
SMARCB1-202ENST00000344921 CCDC83Q8IWF9 413 aa23.92■■□□□ 1.42
SMARCB1-202ENST00000344921 MEIS2O14770 477 aa23.91■■□□□ 1.42
SMARCB1-202ENST00000344921 UBE2SQ16763 222 aa23.91■■□□□ 1.42
SMARCB1-202ENST00000344921 PXMP2Q9NR77 195 aa23.91■■□□□ 1.42
SMARCB1-202ENST00000344921 POTEFA5A3E0 1075 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 PIK3CDO00329 1044 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 SEPT4O43236 478 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 CTDNEP1O95476 244 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 ZNF865P0CJ78 1059 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 CCDC148Q8NFR7 591 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 U2AF1L4Q8WU68 220 aaKnown RBP23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 IWS1Q96ST2 819 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 RIC8AQ9NPQ8 531 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 VPS54Q9P1Q0 977 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 MCM2P49736 904 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 ANO1Q5XXA6 986 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 FBXO16Q8IX29 292 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 GLT8D2Q9H1C3 349 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 C6orf50Q9HD87 102 aa23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 ORC3Q9UBD5 711 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 DDX20Q9UHI6 824 aaKnown RBP23.9■■□□□ 1.42
SMARCB1-202ENST00000344921 SPDYE3A6NKU9 549 aa23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 MSCO60682 206 aa23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 SGPL1O95470 568 aa23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 TFRCP02786 760 aaKnown RBP23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 MYCLP12524 364 aaPredicted RBP23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 MORC4Q8TE76 937 aa23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 FAM184BQ9ULE4 1060 aa23.89■■□□□ 1.41
SMARCB1-202ENST00000344921 STK36Q9NRP7 1315 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 CD2BP2O95400 341 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 NR3C2P08235 984 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 AKR1A1P14550 325 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 GNA11P29992 359 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 GJA8P48165 433 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 STXBP2Q15833 593 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 CCDC144BQ3MJ40 725 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 NSUN7Q8NE18 718 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 VTA1Q9NP79 307 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 SH3GLB2Q9NR46 395 aa23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 KIAA0100Q14667 2235 aaKnown RBP23.88■■□□□ 1.41
SMARCB1-202ENST00000344921 EDNRBP24530 442 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 NLRP5P59047 1200 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 WASF1Q92558 559 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 AIFM3Q96NN9 605 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 PDCD2LQ9BRP1 358 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 ZMYND12Q9H0C1 365 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 XBP1P17861 261 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 EN2P19622 333 aaPredicted RBP23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 ST3GAL1Q11201 340 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 PGM5Q15124 567 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 KATNBL1Q9H079 304 aa23.87■■□□□ 1.41
SMARCB1-202ENST00000344921 ESYT2A0FGR8 921 aa23.86■■□□□ 1.41
SMARCB1-202ENST00000344921 JAK2O60674 1132 aa23.86■■□□□ 1.41
SMARCB1-202ENST00000344921 RARBP10826 455 aa23.86■■□□□ 1.41
SMARCB1-202ENST00000344921 PDGFCQ9NRA1 345 aa23.86■■□□□ 1.41
SMARCB1-202ENST00000344921 PCDHA6Q9UN73 950 aa23.86■■□□□ 1.41
SMARCB1-202ENST00000344921 PCDHA8Q9Y5H6 950 aa23.86■■□□□ 1.41
SMARCB1-202ENST00000344921 CCND2P30279 289 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 ADCYAP1R1P41586 468 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 LHX8Q68G74 356 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 TEX2Q8IWB9 1127 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 BICD2Q8TD16 824 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 TMX3Q96JJ7 454 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 ALG1Q9BT22 464 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 EHMT1Q9H9B1 1298 aa23.85■■□□□ 1.41
SMARCB1-202ENST00000344921 MYCNP04198 464 aaPredicted RBP23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 SEPT14Q6ZU15 432 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 LLPHQ9BRT6 129 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 EIF3JO75822 258 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 FOSP01100 380 aaPredicted RBP23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 FDPSP14324 419 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 TNFAIP2Q03169 654 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 JAKMIP3Q5VZ66 844 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 TAPT1Q6NXT6 567 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 REXO1Q8N1G1 1221 aaKnown RBP23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 IL31RAQ8NI17 732 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 PGBD1Q96JS3 809 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 TMEM260Q9NX78 707 aa23.84■■□□□ 1.41
SMARCB1-202ENST00000344921 IQSEC1Q6DN90 963 aa23.83■■□□□ 1.41
SMARCB1-202ENST00000344921 VSIG10LQ86VR7 867 aa23.83■■□□□ 1.41
SMARCB1-202ENST00000344921 LENG1Q96BZ8 264 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-202ENST00000344921 ZFP91Q96JP5 570 aaPredicted RBP23.83■■□□□ 1.41
SMARCB1-202ENST00000344921 CRISPLD2Q9H0B8 497 aa23.83■■□□□ 1.41
SMARCB1-202ENST00000344921 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 AP3B2Q13367 1082 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 SCFD2Q8WU76 684 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 SHISA4Q96DD7 197 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 WDR11Q9BZH6 1224 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 XPNPEP3Q9NQH7 507 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 OGDHLQ9ULD0 1010 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 LRRC37A2A6NM11 1700 aa23.82■■□□□ 1.4
SMARCB1-202ENST00000344921 FOSBP53539 338 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 ANO3Q9BYT9 981 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 PCDHA4Q9UN74 947 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms