RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ZMYND8Q9ULU4 1186 aaPredicted RBP15.92■□□□□ 0.14
TPM4-202ENST00000344824 PCDHA1Q9Y5I3 950 aa15.92■□□□□ 0.14
TPM4-202ENST00000344824 MYH7BA7E2Y1 1941 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.91■□□□□ 0.14
TPM4-202ENST00000344824 ADCY6O43306 1168 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 CYTH3O43739 400 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 PFKFB2O60825 505 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 PPP1R11O60927 126 aaPredicted RBP15.91■□□□□ 0.14
TPM4-202ENST00000344824 CALM1P0DP23 149 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 CALM2P0DP24 149 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 CALM3P0DP25 149 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 COL6A1P12109 1028 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 METAP2P50579 478 aaKnown RBP eCLIP15.91■□□□□ 0.14
TPM4-202ENST00000344824 SCRN1Q12765 414 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 LRRC26Q2I0M4 334 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 CMTR1Q8N1G2 835 aaKnown RBP15.91■□□□□ 0.14
TPM4-202ENST00000344824 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 GTF3C6Q969F1 213 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 RIOX1Q9H6W3 641 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 SPC25Q9HBM1 224 aa15.91■□□□□ 0.14
TPM4-202ENST00000344824 SEC63Q9UGP8 760 aaKnown RBP15.91■□□□□ 0.14
TPM4-202ENST00000344824 SYN1P17600 705 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 EVCP57679 992 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 TNFAIP2Q03169 654 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 RRP36Q96EU6 259 aaKnown RBP15.9■□□□□ 0.14
TPM4-202ENST00000344824 KATNBL1Q9H079 304 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 PDGFCQ9NRA1 345 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 ATP11BQ9Y2G3 1177 aa15.9■□□□□ 0.14
TPM4-202ENST00000344824 MYADML2A6NDP7 307 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 PPFIA3O75145 1194 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 DUSP11O75319 330 aaKnown RBP15.89■□□□□ 0.13
TPM4-202ENST00000344824 EIF2AK2P19525 551 aaKnown RBP15.89■□□□□ 0.13
TPM4-202ENST00000344824 PTGS1P23219 599 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 GNAQP50148 359 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
TPM4-202ENST00000344824 CUL4AQ13619 759 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 RTN1Q16799 776 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 TLK2Q86UE8 772 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 DNERQ8NFT8 737 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 SYTL5Q8TDW5 730 aaPredicted RBP15.89■□□□□ 0.13
TPM4-202ENST00000344824 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 VTA1Q9NP79 307 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 TRIOBPQ9H2D6 2365 aa15.89■□□□□ 0.13
TPM4-202ENST00000344824 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 hCG_1642624A0A1W2PR95 340 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 B4DLN1 442 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 ADAMTS4O75173 837 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 CDC27P30260 824 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 HOXA13P31271 388 aaPredicted RBP15.88■□□□□ 0.13
TPM4-202ENST00000344824 MRPL12P52815 198 aaKnown RBP15.88■□□□□ 0.13
TPM4-202ENST00000344824 RTP1P59025 263 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 BEX3Q00994 111 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 ARHGEF16Q5VV41 709 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 RMDN3Q96TC7 470 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 MAP3K14Q99558 947 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 SPZ1Q9BXG8 430 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 COL20A1Q9P218 1284 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
TPM4-202ENST00000344824 A0A1W2PQ45 241 aaPredicted RBP15.87■□□□□ 0.13
TPM4-202ENST00000344824 A0A1W2PQY0 241 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 CPLX1O14810 134 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 SMPD1P17405 629 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 ADD1P35611 737 aaKnown RBP15.87■□□□□ 0.13
TPM4-202ENST00000344824 TRAF1Q13077 416 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 SRBD1Q8N5C6 995 aaKnown RBP15.87■□□□□ 0.13
TPM4-202ENST00000344824 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 VTI1AQ96AJ9 217 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 LZTS2Q9BRK4 669 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 AP5M1Q9H0R1 490 aa15.87■□□□□ 0.13
TPM4-202ENST00000344824 LTBP2Q14767 1821 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 OPLAHO14841 1288 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 DYNC1LI2O43237 492 aaPredicted RBP15.86■□□□□ 0.13
TPM4-202ENST00000344824 KCNA10Q16322 511 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 GNASQ5JWF2 1037 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 TMEM63BQ5T3F8 832 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 TAPT1Q6NXT6 567 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 TMTC3Q6ZXV5 915 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 FCHSD1Q86WN1 690 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 FANCBQ8NB91 859 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 MORC4Q8TE76 937 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 NSUN6Q8TEA1 469 aaKnown RBP15.86■□□□□ 0.13
TPM4-202ENST00000344824 PRDM5Q9NQX1 630 aaPredicted RBP15.86■□□□□ 0.13
TPM4-202ENST00000344824 STARD7Q9NQZ5 370 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 PHF24Q9UPV7 400 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
TPM4-202ENST00000344824 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
TPM4-202ENST00000344824 LOC102724159A0A0B4J2E5 919 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 JAK2O60674 1132 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 ABCB7O75027 752 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 POLR2MP0CAP2 368 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 MYCLP12524 364 aaPredicted RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 PWP2Q15269 919 aaKnown RBP15.85■□□□□ 0.13
TPM4-202ENST00000344824 TRIM60Q495X7 471 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 SLC39A5Q6ZMH5 540 aa15.85■□□□□ 0.13
TPM4-202ENST00000344824 SEPT14Q6ZU15 432 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms