RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 ZNF804AQ7Z570 1209 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 C2CD5Q86YS7 1000 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
PTPRR-202ENST00000342084 ANKRD13CQ8N6S4 541 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 C8orf37Q96NL8 207 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 TUBB2BQ9BVA1 445 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 SPZ1Q9BXG8 430 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 MMRN2Q9H8L6 949 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 JADE2Q9NQC1 790 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 BLOC1S4Q9NUP1 217 aa8.11□□□□□ -1.11
PTPRR-202ENST00000342084 ZNHIT6Q9NWK9 470 aaKnown RBP8.11□□□□□ -1.11
PTPRR-202ENST00000342084 SEC63Q9UGP8 760 aaKnown RBP8.11□□□□□ -1.11
PTPRR-202ENST00000342084 THSD7AQ9UPZ6 1657 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 F8W031 263 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 LAD1O00515 517 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 NCK2O43639 380 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 MOCS3O95396 460 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CAPN2P17655 700 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CXCR5P32302 372 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 PPP4CP60510 307 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 KRT83P78385 493 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 APBA1Q02410 837 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CACNB1Q02641 598 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 PAPD7Q5XG87 772 aaKnown RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 GALNT17Q6IS24 598 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 NEDD1Q8NHV4 660 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CCDC47Q96A33 483 aaKnown RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 AK8Q96MA6 479 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 PLEKHA4Q9H4M7 779 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 ARHGAP20Q9P2F6 1191 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 LCMT1Q9UIC8 334 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CDK5RAP2Q96SN8 1893 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 NHSQ6T4R5 1651 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 BICDL2A1A5D9 508 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 LRRC53A6NM62 1247 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 EIF3CLB5ME19 914 aaKnown RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 KRT86O43790 486 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 MYL1P05976 194 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 RFC4P35249 363 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 MATR3P43243 847 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 TNNI2P48788 182 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 RHBDL3P58872 404 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 GPS2Q13227 327 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 VWA3BQ502W6 1294 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 WDR93Q6P2C0 686 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 SNX29Q8TEQ0 813 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 NOC3LQ8WTT2 800 aaKnown RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 COG1Q8WTW3 980 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 EXOC4Q96A65 974 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CALML4Q96GE6 196 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CCDC42Q96M95 316 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 EIF3CQ99613 913 aaKnown RBP8.1□□□□□ -1.11
PTPRR-202ENST00000342084 FGFBP2Q9BYJ0 223 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CUEDC2Q9H467 287 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 KANSL2Q9H9L4 492 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 CD209Q9NNX6 404 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 TBC1D7Q9P0N9 293 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 SIK3Q9Y2K2 1263 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
PTPRR-202ENST00000342084 BTAF1O14981 1849 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 PPP1R11O60927 126 aaPredicted RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 IPO7O95373 1038 aaKnown RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 SYF2O95926 243 aaKnown RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 SSBP05455 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 PDHBP11177 359 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 AKR1B1P15121 316 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 GNA11P29992 359 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 SLC16A2P36021 539 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 EIF4A3P38919 411 aaKnown RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 DNA2P51530 1060 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 VAV2P52735 878 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 KIF5AQ12840 1032 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 MFSD14BQ5SR56 506 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 CNNM4Q6P4Q7 775 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 NFRKBQ6P4R8 1299 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 DPP8Q6V1X1 898 aaPredicted RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 RRAGAQ7L523 313 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 FAM114A1Q8IWE2 563 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 LARP4BQ92615 738 aaKnown RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 SECISBP2LQ93073 1101 aaKnown RBP8.09□□□□□ -1.11
PTPRR-202ENST00000342084 CDK5RAP3Q96JB5 506 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 MTMR9Q96QG7 549 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 LZTS2Q9BRK4 669 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 NUP58Q9BVL2 599 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 MXD3Q9BW11 206 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 GBP3Q9H0R5 595 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 NDST4Q9H3R1 872 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 FAM204AQ9H8W3 233 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 SALL4Q9UJQ4 1053 aa8.09□□□□□ -1.11
PTPRR-202ENST00000342084 GPR75-ASB3A0A0A6YYF3 556 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 NPHP3-ACAD11A0A0J9YXS1 232 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms