RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 DNM1LO00429 736 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PRPF3O43395 683 aaKnown RBP17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 RARBP10826 455 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 HOXA13P31271 388 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 NAPAP54920 295 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 NTRK3Q16288 839 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 ARHGEF16Q5VV41 709 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SMARCC2Q8TAQ2 1214 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 IWS1Q96ST2 819 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PSTPIP2Q9H939 334 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 COLQQ9Y215 455 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF12A-202ENST00000341627 MCM3APO60318 1980 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PIK3CDO00329 1044 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PFKFB2O60825 505 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 CDKL5O76039 1030 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SCG2P13521 617 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 EDNRBP24530 442 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 CCDC144BQ3MJ40 725 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 GJC2Q5T442 439 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 WWC2Q6AWC2 1192 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 NOL8Q76FK4 1167 aaKnown RBP17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 FCHSD1Q86WN1 690 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 TEX2Q8IWB9 1127 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 ARRDC4Q8NCT1 418 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PHKBQ93100 1093 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 KIF2CQ99661 725 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SLC26A6Q9BXS9 759 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 KATNBL1Q9H079 304 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 LCTP09848 1927 aa17.74■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SSRP1Q08945 709 aaKnown RBP17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 RABEP1Q15276 862 aa17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 LRRC26Q2I0M4 334 aa17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 HABP4Q5JVS0 413 aaKnown RBP17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 FBXO16Q8IX29 292 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 CCDC12Q8WUD4 166 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SENP6Q9GZR1 1112 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 GLT8D2Q9H1C3 349 aa17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PXMP2Q9NR77 195 aa17.73■□□□□ 0.43
TNFRSF12A-202ENST00000341627 DNAH12Q6ZR08 3092 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 STXBP3O00186 592 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 EIF2AK2P19525 551 aaKnown RBP17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SCRN1Q12765 414 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 LRRC41Q15345 812 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 STXBP2Q15833 593 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 IQSEC1Q6DN90 963 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 C7orf61Q8IZ16 206 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 LENG1Q96BZ8 264 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 TBC1D32Q96NH3 1257 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PRO3102Q9H379 93 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 XPNPEP3Q9NQH7 507 aa17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
TNFRSF12A-202ENST00000341627 MEIS2O14770 477 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 DUSP11O75319 330 aaKnown RBP17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 NR3C2P08235 984 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 ADCY7P51828 1080 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 TNFAIP2Q03169 654 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 USP17L6PQ6QN14 398 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 CHRDL2Q6WN34 429 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 LIMCH1Q9UPQ0 1083 aa17.71■□□□□ 0.43
TNFRSF12A-202ENST00000341627 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ADCY6O43306 1168 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ST18O60284 1047 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 PPFIA3O75145 1194 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ADAMTS4O75173 837 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 EIF3JO75822 258 aaKnown RBP17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 DEXIO95424 95 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 PGK1P00558 417 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ADCYAP1R1P41586 468 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 PKN1Q16512 942 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ME3Q16798 604 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 TYW1BQ6NUM6 668 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 TAPT1Q6NXT6 567 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 RNF180Q86T96 592 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 SCFD2Q8WU76 684 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 RIC8AQ9NPQ8 531 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 PDGFCQ9NRA1 345 aa17.7■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ESYT2A0FGR8 921 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 MYCLP12524 364 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 CCND2P30279 289 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 PGM5Q15124 567 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 GTF3C6Q969F1 213 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ZSCAN31Q96LW9 406 aaPredicted RBP17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 EHMT1Q9H9B1 1298 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 C6orf50Q9HD87 102 aa17.69■□□□□ 0.42
TNFRSF12A-202ENST00000341627 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms