RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
TDP2-201ENST00000341060 MYH10P35580 1976 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 PVALEFA0A1B0GWK0 134 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 KRT86O43790 486 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 SLC37A4O43826 429 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 ERLIN1O75477 346 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
TDP2-201ENST00000341060 CYP2C19P33261 490 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 EN1Q05925 392 aaPredicted RBP16.24■□□□□ 0.19
TDP2-201ENST00000341060 TMEM266Q2M3C6 531 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 UNC13DQ70J99 1090 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 LARP4BQ92615 738 aaKnown RBP16.24■□□□□ 0.19
TDP2-201ENST00000341060 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 ZNHIT6Q9NWK9 470 aaKnown RBP16.24■□□□□ 0.19
TDP2-201ENST00000341060 EDIL3O43854 480 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 TUBBP07437 444 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 KLK7P49862 253 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 CDK17Q00537 523 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 PDIA5Q14554 519 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 COA7Q96BR5 231 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 RAB34Q9BZG1 259 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 NHEJ1Q9H9Q4 299 aaPredicted RBP16.24■□□□□ 0.19
TDP2-201ENST00000341060 SLC39A2Q9NP94 309 aa16.24■□□□□ 0.19
TDP2-201ENST00000341060 MYMKA6NI61 221 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 EIF3CLB5ME19 914 aaKnown RBP16.23■□□□□ 0.19
TDP2-201ENST00000341060 NCAPH2Q6IBW4 605 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 PPP1R18Q6NYC8 613 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 LRRC47Q8N1G4 583 aaKnown RBP16.23■□□□□ 0.19
TDP2-201ENST00000341060 HPS3Q969F9 1004 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 PNMA5Q96PV4 448 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 EIF3CQ99613 913 aaKnown RBP16.23■□□□□ 0.19
TDP2-201ENST00000341060 ABCB11O95342 1321 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 ATAD5Q96QE3 1844 aa16.23■□□□□ 0.19
TDP2-201ENST00000341060 POLR3GO15318 223 aaPredicted RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 TDP2O95551 362 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 AKR1B1P15121 316 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 HOXA7P31268 230 aaPredicted RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 PICALMQ13492 652 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 MCM6Q14566 821 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 EZH2Q15910 746 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 FKBP15Q5T1M5 1219 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 MSL3Q8N5Y2 521 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 JAKMIP2Q96AA8 810 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 CDK5RAP3Q96JB5 506 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 MYO3BQ8WXR4 1341 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 POTEMA6NI47 508 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 C6orf229H3BNL8 230 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 NKRFO15226 690 aaKnown RBP eCLIP16.22■□□□□ 0.19
TDP2-201ENST00000341060 RHOXF2BP0C7M4 288 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 GTF2IP78347 998 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 PAPD7Q5XG87 772 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 HDXQ7Z353 690 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 GUF1Q8N442 669 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 NOA1Q8NC60 698 aaKnown RBP16.22■□□□□ 0.19
TDP2-201ENST00000341060 RHOXF2Q9BQY4 288 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 RIC8AQ9NPQ8 531 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 TFR2Q9UP52 801 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 SUGT1Q9Y2Z0 365 aa16.22■□□□□ 0.19
TDP2-201ENST00000341060 PNMA6FA0A0J9YX94 578 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 TTLL1O95922 423 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 HNRNPH3P31942 346 aaKnown RBP16.21■□□□□ 0.19
TDP2-201ENST00000341060 VSNL1P62760 191 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 ZNF543Q08ER8 600 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
TDP2-201ENST00000341060 TMC4Q7Z404 712 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 RAD54LQ92698 747 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 PCMTD1Q96MG8 357 aaPredicted RBP16.21■□□□□ 0.19
TDP2-201ENST00000341060 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.21■□□□□ 0.19
TDP2-201ENST00000341060 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 SAR1BQ9Y6B6 198 aa16.21■□□□□ 0.19
TDP2-201ENST00000341060 CCDC66A2RUB6 948 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 KLRG2A4D1S0 409 aaPredicted RBP16.21■□□□□ 0.18
TDP2-201ENST00000341060 ENC1O14682 589 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 ATP1A1P05023 1023 aaKnown RBP16.21■□□□□ 0.18
TDP2-201ENST00000341060 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.18
TDP2-201ENST00000341060 LRRC63Q05C16 580 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 EHHADHQ08426 723 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 KRT79Q5XKE5 535 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 WDR93Q6P2C0 686 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 PURBQ96QR8 312 aaKnown RBP16.21■□□□□ 0.18
TDP2-201ENST00000341060 LACRTQ9GZZ8 138 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 GBP3Q9H0R5 595 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 JMJD4Q9H9V9 463 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 ABCB6Q9NP58 842 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 DDX4Q9NQI0 724 aaKnown RBP16.21■□□□□ 0.18
TDP2-201ENST00000341060 SWAP70Q9UH65 585 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 SERPINB13Q9UIV8 391 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 PLAGL2Q9UPG8 496 aa16.21■□□□□ 0.18
TDP2-201ENST00000341060 SIPA1L1O43166 1804 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 ANO9A1A5B4 782 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 RCCD1A6NED2 376 aa16.2■□□□□ 0.18
TDP2-201ENST00000341060 EIF6P56537 245 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms