RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ATP1A3P13637 1013 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 RIOX1Q9H6W3 641 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 TMEM260Q9NX78 707 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 PHACTR2O75167 634 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 ECM2O94769 699 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-201ENST00000340611 NT5C2P49902 561 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 MCM6Q14566 821 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 EAPPQ56P03 285 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-201ENST00000340611 WRNIP1Q96S55 665 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 MED4Q9NPJ6 270 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 BARHL2Q9NY43 387 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 RTEL1Q9NZ71 1219 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
BRAT1-201ENST00000340611 ZNF174Q15697 407 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 CC2D1AQ6P1N0 951 aaPredicted RBP16.92■□□□□ 0.3
BRAT1-201ENST00000340611 FOXP1Q9H334 677 aaPredicted RBP16.92■□□□□ 0.3
BRAT1-201ENST00000340611 SPTLC2O15270 562 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 FANCGO15287 622 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 USH1GQ495M9 461 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 MOB2Q70IA6 237 aa16.92■□□□□ 0.3
BRAT1-201ENST00000340611 BIN2Q9UBW5 565 aaPredicted RBP16.92■□□□□ 0.3
BRAT1-201ENST00000340611 SMCO2A6NFE2 343 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 KIF1CO43896 1103 aaKnown RBP16.91■□□□□ 0.3
BRAT1-201ENST00000340611 TBC1D12O60347 775 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 ETF1P62495 437 aaKnown RBP16.91■□□□□ 0.3
BRAT1-201ENST00000340611 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 TNFRSF25Q93038 417 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 SEMA3FQ13275 785 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
BRAT1-201ENST00000340611 UBE2SQ16763 222 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 JAKMIP3Q5VZ66 844 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 UIMC1Q96RL1 719 aa16.91■□□□□ 0.3
BRAT1-201ENST00000340611 CORO7P57737 925 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 PTPAQ15257 358 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 SLC24A3Q9HC58 644 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 ARHGEF10LQ9HCE6 1279 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 ADARB2Q9NS39 739 aaKnown RBP16.9■□□□□ 0.3
BRAT1-201ENST00000340611 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 BMP3P12645 472 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 FANCCQ00597 558 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 QRICH1Q2TAL8 776 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 ADALQ6DHV7 355 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 NRDCO43847 1150 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 N4BP1O75113 896 aaKnown RBP16.9■□□□□ 0.3
BRAT1-201ENST00000340611 NCAPHQ15003 741 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 INF2Q27J81 1249 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
BRAT1-201ENST00000340611 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 KIFC2Q96AC6 838 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 PDE11AQ9HCR9 933 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 ARFGAP3Q9NP61 516 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
BRAT1-201ENST00000340611 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 ASNSP08243 561 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 LIG3P49916 1009 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-201ENST00000340611 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-201ENST00000340611 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
BRAT1-201ENST00000340611 APOBEC3FQ8IUX4 373 aaKnown RBP16.89■□□□□ 0.29
BRAT1-201ENST00000340611 ZSWIM4Q9H7M6 989 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 MCM7P33993 719 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 SPP2Q13103 211 aa16.89■□□□□ 0.29
BRAT1-201ENST00000340611 SWT1Q5T5J6 900 aaKnown RBP16.89■□□□□ 0.29
BRAT1-201ENST00000340611 CALR3Q96L12 384 aaKnown RBP16.89■□□□□ 0.29
BRAT1-201ENST00000340611 MTMR2Q13614 643 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 ZNF202O95125 648 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 HSP90AA4PQ58FG1 418 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 FBXW10Q5XX13 1052 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 TTC19Q6DKK2 380 aaPredicted RBP16.88■□□□□ 0.29
BRAT1-201ENST00000340611 TRIM65Q6PJ69 517 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
BRAT1-201ENST00000340611 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
BRAT1-201ENST00000340611 EPHX2P34913 555 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP49Q70CQ1 688 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 IQUBQ8NA54 791 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 PRR12Q9ULL5 1215 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
BRAT1-201ENST00000340611 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms