RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RPS6KB1P23443 525 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
VAPA-201ENST00000340541 GNAQP50148 359 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 ACLYP53396 1101 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 ZNF697Q5TEC3 545 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 CCSAPQ6IQ19 270 aaPredicted RBP17.84■□□□□ 0.45
VAPA-201ENST00000340541 TAPT1Q6NXT6 567 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 BLOC1S2Q6QNY1 142 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 TMTC3Q6ZXV5 915 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 SH3RF1Q7Z6J0 888 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 MICU3Q86XE3 530 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 MCF2L2Q86YR7 1114 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 FBXL16Q8N461 479 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 PCSK9Q8NBP7 692 aaKnown RBP17.84■□□□□ 0.45
VAPA-201ENST00000340541 DNERQ8NFT8 737 aa17.84■□□□□ 0.45
VAPA-201ENST00000340541 ELP1O95163 1332 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 SYNRGQ9UMZ2 1314 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.83■□□□□ 0.44
VAPA-201ENST00000340541 DCDC2CA8MYV0 355 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 HSD17B4P51659 736 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 KCNA10Q16322 511 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 FBXO16Q8IX29 292 aaPredicted RBP17.83■□□□□ 0.44
VAPA-201ENST00000340541 PIBF1Q8WXW3 757 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 AGXT2Q9BYV1 514 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 SPC25Q9HBM1 224 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 VTA1Q9NP79 307 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.44
VAPA-201ENST00000340541 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.44
VAPA-201ENST00000340541 MROH7Q68CQ1 1323 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 KLF18A0A0U1RQI7 1052 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 RAG1P15918 1043 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 NKX3-2P78367 333 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 IRX5P78411 483 aaPredicted RBP17.82■□□□□ 0.44
VAPA-201ENST00000340541 C9orf50Q5SZB4 431 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 TMEM63BQ5T3F8 832 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 Q6ZUG5 572 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 GUCD1Q96NT3 240 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 TAAR1Q96RJ0 339 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 ZSWIM6Q9HCJ5 1215 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 STARD7Q9NQZ5 370 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
VAPA-201ENST00000340541 TMEM39AQ9NV64 488 aa17.82■□□□□ 0.44
VAPA-201ENST00000340541 MYADML2A6NDP7 307 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 CTAGE5O15320 804 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 ZBTB43O43298 467 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 CFBP00751 764 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 CASTP20810 708 aaKnown RBP17.81■□□□□ 0.44
VAPA-201ENST00000340541 PTGS1P23219 599 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 PSMA5P28066 241 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 RCAN1P53805 252 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 GJA9P57773 515 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 FAAP100Q0VG06 881 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 FUT2Q10981 343 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 TRAF1Q13077 416 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 SYNE3Q6ZMZ3 975 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 BRF1Q92994 677 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
VAPA-201ENST00000340541 GLT1D1Q96MS3 346 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
VAPA-201ENST00000340541 SEMA6BQ9H3T3 888 aa17.81■□□□□ 0.44
VAPA-201ENST00000340541 GNEQ9Y223 722 aaKnown RBP17.81■□□□□ 0.44
VAPA-201ENST00000340541 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 RBM47A0AV96 593 aaKnown RBP17.8■□□□□ 0.44
VAPA-201ENST00000340541 PQBP1O60828 265 aaKnown RBP17.8■□□□□ 0.44
VAPA-201ENST00000340541 SMPD1P17405 629 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 ITGB8P26012 769 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 CDK7P50613 346 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 APOBRQ0VD83 1088 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 RTN1Q16799 776 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 TM6SF1Q9BZW5 370 aa17.8■□□□□ 0.44
VAPA-201ENST00000340541 RBM28Q9NW13 759 aaKnown RBP17.8■□□□□ 0.44
VAPA-201ENST00000340541 MAP3K20Q9NYL2 800 aaKnown RBP17.8■□□□□ 0.44
VAPA-201ENST00000340541 NID2Q14112 1375 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 CNTNAP5Q8WYK1 1306 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 hCG_1642624A0A1W2PR95 340 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 CDC27P30260 824 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
VAPA-201ENST00000340541 EVCP57679 992 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 FPGSQ05932 587 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 PDE4DQ08499 809 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 RUFY3Q7L099 469 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 CCDC82Q8N4S0 544 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 NSUN6Q8TEA1 469 aaKnown RBP17.79■□□□□ 0.44
VAPA-201ENST00000340541 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
VAPA-201ENST00000340541 GOLGA8AA7E2F4 631 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 GOLGA8BA8MQT2 603 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 SEC24BO95487 1268 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 TIMP1P01033 207 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 ASGR1P07306 291 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 C6orf222P0C671 652 aaPredicted RBP17.78■□□□□ 0.44
VAPA-201ENST00000340541 FGD1P98174 961 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
VAPA-201ENST00000340541 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 PXMP2Q9NR77 195 aa17.78■□□□□ 0.44
VAPA-201ENST00000340541 SEC63Q9UGP8 760 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms