RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KIF5CO60282 957 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CCT6AP40227 531 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FAM193AP78312 1265 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 UBXN1Q04323 297 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 NFIAQ12857 509 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 STK4Q13043 487 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ELF2Q15723 593 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CSGALNACT2Q8N6G5 542 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 HAS1Q92839 578 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 WDR24Q96S15 920 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 EDEM3Q9BZQ6 932 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 VPS16Q9H269 839 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TMEM260Q9NX78 707 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 KRT9P35527 623 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ASIC1P78348 528 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TRAF1Q13077 416 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CCDC170Q8IYT3 715 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GPR161Q8N6U8 529 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TUBGCP2Q9BSJ2 902 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 VAT1LQ9HCJ6 419 aa11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DDX25Q9UHL0 483 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TRIM49BA6NDI0 452 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 H0YIN7 160 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TDP2O95551 362 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FOSP01100 380 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DOK7Q18PE1 504 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FBXO38Q6PIJ6 1188 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ZC3H3Q8IXZ2 948 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SLFN12Q8IYM2 578 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 VPS33BQ9H267 617 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 LUC7L2Q9Y383 392 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MYMKA6NI61 221 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TXKP42681 527 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MARSP56192 900 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ZBED6P86452 979 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MTF1Q14872 753 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PTPN21Q16825 1174 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 Q4G0T1 1027 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MIIPQ5JXC2 388 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SH3BP5LQ7L8J4 393 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 C2CD5Q86YS7 1000 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SIAH1Q8IUQ4 282 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 UBXN4Q92575 508 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 GPCPD1Q9NPB8 672 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PITPNM2Q9BZ72 1349 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 EP400Q96L91 3159 aa11.97□□□□□ -0.49
TRAF3IP2-201ENST00000340026 TTC26A0AVF1 554 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 FRMD3A2A2Y4 597 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 G3V3G9 751 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ECE2O60344 883 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 URI1O94763 535 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CIITAP33076 1130 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ARHGAP25P42331 645 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 NAA30Q147X3 362 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CNOT6LQ96LI5 555 aaKnown RBP11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 HAUS4Q9H6D7 363 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ARGLU1Q9NWB6 273 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SCNN1DP51172 638 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CEP112Q8N8E3 955 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MNS1Q8NEH6 495 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 SEMA6BQ9H3T3 888 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 CDC23Q9UJX2 597 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 MTMR7Q9Y216 660 aa11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 EPN1Q9Y6I3 576 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-201ENST00000340026 USP17L10C9JJH3 530 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 F8W031 263 aaPredicted RBP11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 RNF225M0QZC1 329 aaPredicted RBP11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 PLA2G6O60733 806 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 NDUFA10O95299 355 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 APBA3O96018 575 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 TUBBP07437 444 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 ERCC6LQ2NKX8 1250 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 QRICH1Q2TAL8 776 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 SLFN13Q68D06 897 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 SNX29Q8TEQ0 813 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 DESI2Q9BSY9 194 aa11.96□□□□□ -0.5
TRAF3IP2-201ENST00000340026 DDTLA6NHG4 134 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 EIF3CLB5ME19 914 aaKnown RBP11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 CYP3A4P08684 503 aa11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 KRT83P78385 493 aa11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 PPP2R3AQ06190 1150 aa11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 FKBP1CQ5VVH2 108 aa11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 WDR59Q6PJI9 974 aa11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 CCDC84Q86UT8 332 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP2-201ENST00000340026 MSL3Q8N5Y2 521 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms