RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 PGBD1Q96JS3 809 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 RMDN3Q96TC7 470 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 PXMP2Q9NR77 195 aa20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 ADD3Q9UEY8 706 aaKnown RBP20.41■□□□□ 0.86
SDCBP2-201ENST00000339987 LOC102724159A0A0B4J2E5 919 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 PGK2P07205 417 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 TRAPPC10P48553 1259 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 PWP2Q15269 919 aaKnown RBP20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 ZNF792Q3KQV3 632 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 NSUN6Q8TEA1 469 aaKnown RBP20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 USP6NLQ92738 828 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 ERO1AQ96HE7 468 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 TRIM47Q96LD4 638 aa20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 PURBQ96QR8 312 aaKnown RBP20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 DIS3Q9Y2L1 958 aaKnown RBP20.4■□□□□ 0.86
SDCBP2-201ENST00000339987 SOWAHBA6NEL2 793 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 COBLO75128 1261 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 HOXC6P09630 235 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 ARHGAP4P98171 946 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 MAP2K5Q13163 448 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 INF2Q27J81 1249 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 RILPL1Q5EBL4 403 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 ARHGEF16Q5VV41 709 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 MYSM1Q5VVJ2 828 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 FGD4Q96M96 766 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 IWS1Q96ST2 819 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 NUDT12Q9BQG2 462 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 PDCD2LQ9BRP1 358 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 ARHGAP39Q9C0H5 1083 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 SLC5A4Q9NY91 659 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 GJD2Q9UKL4 321 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 ATP6V1DQ9Y5K8 247 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 ASTN1O14525 1302 aa20.39■□□□□ 0.85
SDCBP2-201ENST00000339987 ZSWIM8A7E2V4 1837 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 CYP3A4P08684 503 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 ALDH5A1P51649 535 aaPredicted RBP20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 USP11P51784 963 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 XRRA1Q6P2D8 792 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 ZNF467Q7Z7K2 595 aaPredicted RBP20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 NEK8Q86SG6 692 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 CD99L2Q8TCZ2 262 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 ZNF296Q8WUU4 475 aaPredicted RBP20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 MYH7BA7E2Y1 1941 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 PLXNA1Q9UIW2 1896 aa20.38■□□□□ 0.85
SDCBP2-201ENST00000339987 B4DLN1 442 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 GNRH1P01148 92 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 RGS2P41220 211 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 ARHGEF6Q15052 776 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 PGM5Q15124 567 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 PCNX4Q63HM2 1172 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 DPP9Q86TI2 863 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 NAP1L4Q99733 375 aaKnown RBP20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 DOCK3Q8IZD9 2030 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 MYH15Q9Y2K3 1946 aa20.37■□□□□ 0.85
SDCBP2-201ENST00000339987 EDIL3O43854 480 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 ECM2O94769 699 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 EDNRBP24530 442 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 TOB1P50616 345 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 COL13A1Q5TAT6 717 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 MOXD1Q6UVY6 613 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 MORC4Q8TE76 937 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 TSKSQ9UJT2 592 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 NR3C2P08235 984 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 GCFC2P16383 781 aaKnown RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 HOXD10P28358 340 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 CCND2P30279 289 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 CIITAP33076 1130 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 CAP1Q01518 475 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 ORC2Q13416 577 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 TTC38Q5R3I4 469 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 ATL3Q6DD88 541 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 FAM173BQ6P4H8 233 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 MSL3Q8N5Y2 521 aaKnown RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 IL31RAQ8NI17 732 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 ZNF396Q96N95 335 aaPredicted RBP20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 APBA2Q99767 749 aa20.36■□□□□ 0.85
SDCBP2-201ENST00000339987 CYP3A7-CYP3A51PA0A087WV96 503 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 ASB14A6NK59 587 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 CYP3A7P24462 503 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 UBXN2AP68543 259 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 PPP4R3AQ6IN85 833 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 VSIG10LQ86VR7 867 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 NPLOC4Q8TAT6 608 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 MAML3Q96JK9 1138 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 MBOAT7Q96N66 472 aa20.35■□□□□ 0.85
SDCBP2-201ENST00000339987 STAM2O75886 525 aa20.34■□□□□ 0.85
SDCBP2-201ENST00000339987 XRCC5P13010 732 aaKnown RBP20.34■□□□□ 0.85
SDCBP2-201ENST00000339987 LETM2Q2VYF4 491 aa20.34■□□□□ 0.85
SDCBP2-201ENST00000339987 MAMDC4Q6UXC1 1216 aa20.34■□□□□ 0.85
SDCBP2-201ENST00000339987 SRRDQ9UH36 339 aa20.34■□□□□ 0.85
SDCBP2-201ENST00000339987 LRRC37A2A6NM11 1700 aa20.34■□□□□ 0.85
SDCBP2-201ENST00000339987 CASP8AP2Q9UKL3 1982 aa20.33■□□□□ 0.85
SDCBP2-201ENST00000339987 WNT7AO00755 349 aa20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 FLT3LGP49771 235 aa20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 MRPS9P82933 396 aaKnown RBP20.33■□□□□ 0.84
SDCBP2-201ENST00000339987 STXBP2Q15833 593 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms