RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 BTNL9Q6UXG8 535 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 DYMQ7RTS9 669 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 POLD4Q9HCU8 107 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 TRMT1Q9NXH9 659 aaKnown RBP8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 TNIP1Q15025 636 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 FKBP1CQ5VVH2 108 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 PPP4R3AQ6IN85 833 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 GLIS3Q8NEA6 775 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 CRYGNQ8WXF5 182 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 ZKSCAN4Q969J2 545 aaPredicted RBP8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 AGBL1Q96MI9 1066 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 TRIM9Q9C026 710 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 VCPKMTQ9H867 229 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 PCDHA12Q9UN75 941 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 MYMKA6NI61 221 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 TBC1D12O60347 775 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 EPS15P42566 896 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 HIRAP54198 1017 aaPredicted RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 MAP3K10Q02779 954 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 RAD51AP2Q09MP3 1159 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 PRKG1Q13976 671 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 DNTTIP2Q5QJE6 756 aaKnown RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 ARHGAP27Q6ZUM4 889 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 FAM177A1Q8N128 213 aaPredicted RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 LENG9Q96B70 501 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 BRCA1P38398 1863 aaKnown RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 MARCH6O60337 910 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 ERCC5P28715 1186 aaPredicted RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 CCT6AP40227 531 aaKnown RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 FXR2P51116 673 aaKnown RBP eCLIP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 TPM4P67936 248 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 ZNF658Q5TYW1 1059 aaPredicted RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 ANGEL2Q5VTE6 544 aaKnown RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 SPATA1Q5VX52 437 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 CEP135Q66GS9 1140 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 PPP1R18Q6NYC8 613 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 SNX29Q8TEQ0 813 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 NELFBQ8WX92 580 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 WNK4Q96J92 1243 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 AK8Q96MA6 479 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 BCAS3Q9H6U6 928 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 GOPCQ9HD26 462 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 SPTLC3Q9NUV7 552 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 ERCC3P19447 782 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 ADKP55263 362 aaKnown RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 CACNB1Q02641 598 aaPredicted RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 KIF4BQ2VIQ3 1234 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 IRF2BP1Q8IU81 584 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 CPXCR1Q8N123 301 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 C16orf45Q96MC5 204 aaPredicted RBP8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 SLC39A2Q9NP94 309 aa8.32□□□□□ -1.08
SRFBP1-201ENST00000339397 COL2A1P02458 1487 aaPredicted RBP8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 POTECB2RU33 542 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 E9PMD0 336 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 MEIS1O00470 390 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 ASNSP08243 561 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 PSMC6P62333 389 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 ASIC1P78348 528 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 MAPK8IP2Q13387 824 aaPredicted RBP8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 NR1I3Q14994 352 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 VSTM4Q8IW00 320 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 CCDC34Q96HJ3 373 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 PURBQ96QR8 312 aaKnown RBP8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 FEZ1Q99689 392 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 KCNMB3Q9NPA1 279 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 HOMER2Q9NSB8 354 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 SPDYE3A6NKU9 549 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 PDE4DQ08499 809 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 MTMR2Q13614 643 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 PDIA5Q14554 519 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 CDKAL1Q5VV42 579 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 LDHDQ86WU2 507 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 ADSSL1Q8N142 457 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 KIAA0895Q8NCT3 520 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 CPLX3Q8WVH0 158 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 VPS16Q9H269 839 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 KIAA1024Q9UPX6 916 aa8.31□□□□□ -1.08
SRFBP1-201ENST00000339397 RNF225M0QZC1 329 aaPredicted RBP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 NFIBO00712 420 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 ZBTB39O15060 712 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 MED24O75448 989 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 SSBP05455 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 USP11P51784 963 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 SPIRE1Q08AE8 756 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 SPP2Q13103 211 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 PAK1Q13153 545 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 LRRC41Q15345 812 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 TSC1Q92574 1164 aa8.3□□□□□ -1.08
SRFBP1-201ENST00000339397 LARP4BQ92615 738 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms