RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 Q9Y3F1 56 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 COL6A3P12111 3177 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 MOXD2PA6NHM9 499 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 hCG_1984214I3L0E3 225 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 NKRFO15226 690 aaKnown RBP eCLIP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 ZEB2O60315 1214 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 COL6A1P12109 1028 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 HOXA13P31271 388 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 GJA9P57773 515 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 TAPT1Q6NXT6 567 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 HEATR3Q7Z4Q2 680 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 ZNF713Q8N859 430 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 PXMP2Q9NR77 195 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
SLC28A1-202ENST00000338602 RBM47A0AV96 593 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 OPLAHO14841 1288 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 DYNC1LI2O43237 492 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 EIF3JO75822 258 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 NR3C2P08235 984 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 ADD1P35611 737 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 EVCP57679 992 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 DUSP28Q4G0W2 176 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 GLT8D2Q9H1C3 349 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 UPF3AQ9H1J1 476 aaKnown RBP13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 PDGFCQ9NRA1 345 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 COL20A1Q9P218 1284 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
SLC28A1-202ENST00000338602 MCM3APO60318 1980 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 hCG_1642624A0A1W2PR95 340 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 H0YGN5 161 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 PIK3CDO00329 1044 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 CPLX1O14810 134 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 MYCLP12524 364 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 SMPD1P17405 629 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 CST5P28325 142 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 CDC27P30260 824 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 CCND2P30279 289 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 NAPAP54920 295 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 TLK2Q86UE8 772 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 KLHDC9Q8NEP7 349 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 LENG1Q96BZ8 264 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 GLT1D1Q96MS3 346 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 GNEQ9Y223 722 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
SLC28A1-202ENST00000338602 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 SPDYE3A6NKU9 549 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 TXNP10599 105 aaKnown RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 ACLYP53396 1101 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 TOB2Q14106 344 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 KCNA10Q16322 511 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 KCNV1Q6PIU1 500 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 FERMT2Q96AC1 680 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 ALDH8A1Q9H2A2 487 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 STARD7Q9NQZ5 370 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 NID2Q14112 1375 aa13.02□□□□□ -0.33
SLC28A1-202ENST00000338602 FRMPD3Q5JV73 1810 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 RANBP2P49792 3224 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 STAM2O75886 525 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 CABYRO75952 493 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 CPT1AP50416 773 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 NKX3-2P78367 333 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 FUT2Q10981 343 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 PGM5Q15124 567 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 XRRA1Q6P2D8 792 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 VSIG10LQ86VR7 867 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
SLC28A1-202ENST00000338602 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms