RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 MTMR9Q96QG7 549 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 NDST4Q9H3R1 872 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 RNF216Q9NWF9 866 aaPredicted RBP23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 DUSP10Q9Y6W6 482 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 FXR2P51116 673 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 GRB10Q13322 594 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 LEKR1Q6ZMV7 388 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 TRIM58Q8NG06 486 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 SNED1Q8TER0 1413 aa23.92■■□□□ 1.42
PTDSS1-201ENST00000337004 HOXA7P31268 230 aaPredicted RBP23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 CCDC96Q2M329 555 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 LARP4BQ92615 738 aaKnown RBP23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 UBA5Q9GZZ9 404 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 RIOX1Q9H6W3 641 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 CD209Q9NNX6 404 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 CCNL1Q9UK58 526 aaPredicted RBP23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 JRKLQ9Y4A0 524 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 ABCB11O95342 1321 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 COL24A1Q17RW2 1714 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 CAPN2P17655 700 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 LRRC27Q9C0I9 530 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 BLOC1S4Q9NUP1 217 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 TMEM260Q9NX78 707 aa23.91■■□□□ 1.42
PTDSS1-201ENST00000337004 MYMKA6NI61 221 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 USP17L5A8MUK1 530 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 TACC1O75410 805 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 TNNT3P45378 269 aaPredicted RBP23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 MAN2A1Q16706 1144 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 CCDC70Q6NSX1 233 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 C2CD5Q86YS7 1000 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 SLF2Q8IX21 1173 aa23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 GUF1Q8N442 669 aaKnown RBP23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 GPR101Q96P66 508 aaPredicted RBP23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 IFIH1Q9BYX4 1025 aaKnown RBP23.9■■□□□ 1.42
PTDSS1-201ENST00000337004 TULP2O00295 520 aa23.89■■□□□ 1.42
PTDSS1-201ENST00000337004 RFC4P35249 363 aa23.89■■□□□ 1.42
PTDSS1-201ENST00000337004 NOVP48745 357 aa23.89■■□□□ 1.42
PTDSS1-201ENST00000337004 PDIA5Q14554 519 aa23.89■■□□□ 1.42
PTDSS1-201ENST00000337004 SLC51AQ86UW1 340 aa23.89■■□□□ 1.42
PTDSS1-201ENST00000337004 SIK3Q9Y2K2 1263 aa23.89■■□□□ 1.42
PTDSS1-201ENST00000337004 AARSP49588 968 aaKnown RBP eCLIP23.89■■□□□ 1.41
PTDSS1-201ENST00000337004 LRRC63Q05C16 580 aa23.89■■□□□ 1.41
PTDSS1-201ENST00000337004 ZBTB9Q96C00 473 aa23.89■■□□□ 1.41
PTDSS1-201ENST00000337004 PNMA5Q96PV4 448 aa23.89■■□□□ 1.41
PTDSS1-201ENST00000337004 DEF6Q9H4E7 631 aa23.89■■□□□ 1.41
PTDSS1-201ENST00000337004 PCDHA13Q9Y5I0 950 aa23.89■■□□□ 1.41
PTDSS1-201ENST00000337004 ZNF263O14978 683 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 ZNF185O15231 689 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 ADCY7P51828 1080 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 CNBD1Q8NA66 436 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 MMRN2Q9H8L6 949 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 FAM207AQ9NSI2 230 aaPredicted RBP23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 NKRFO15226 690 aaKnown RBP eCLIP23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 PHACTR2O75167 634 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 KRT79Q5XKE5 535 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 DYMQ7RTS9 669 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 KRT26Q7Z3Y9 468 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 FAM163AQ96GL9 167 aaPredicted RBP23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 ARHGAP20Q9P2F6 1191 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 SNX12Q9UMY4 172 aa23.88■■□□□ 1.41
PTDSS1-201ENST00000337004 PLEKP08567 350 aaPredicted RBP23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 PDHBP11177 359 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 GPSM2P81274 684 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 RAD51AP2Q09MP3 1159 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 PSMD2Q13200 908 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 GOLGA6L1Q8N7Z2 621 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 SH2D4AQ9H788 454 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 UFL1O94874 794 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 IL1R1P14778 569 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 PRLRP16471 622 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 ATP2B4P23634 1241 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 KIF11P52732 1056 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 RHBDL3P58872 404 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 AMIGO3Q86WK7 504 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 COG1Q8WTW3 980 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 RAD54LQ92698 747 aa23.87■■□□□ 1.41
PTDSS1-201ENST00000337004 PDE2AO00408 941 aaPredicted RBP23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 AKR1B10O60218 316 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 LCA5LO95447 670 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 IVLP07476 585 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 ASPRV1Q53RT3 343 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 TRAPPC3LQ5T215 181 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 CCNI2Q6ZMN8 369 aaPredicted RBP23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 TSG101Q99816 390 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 RIC8AQ9NPQ8 531 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 HPCAL4Q9UM19 191 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 FRMPD2Q68DX3 1309 aaPredicted RBP23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 SLC37A4O43826 429 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 SNX29Q8TEQ0 813 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 COA7Q96BR5 231 aa23.86■■□□□ 1.41
PTDSS1-201ENST00000337004 NAV1Q8NEY1 1877 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 TDP2O95551 362 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 EIF4A3P38919 411 aaKnown RBP23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 IRX5P78411 483 aaPredicted RBP23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 MFSD14BQ5SR56 506 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 ALS2CR12Q96Q35 445 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 EPHB6O15197 1021 aa23.85■■□□□ 1.41
PTDSS1-201ENST00000337004 FOXR2Q6PJQ5 311 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms