RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TTI2Q6NXR4 508 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 SIAH1Q8IUQ4 282 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 HAS1Q92839 578 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 LZTS2Q9BRK4 669 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 TUBGCP2Q9BSJ2 902 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 IKZF4Q9H2S9 585 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 RMND1Q9NWS8 449 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 HDAC6Q9UBN7 1215 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 PPP1R1BQ9UD71 204 aaPredicted RBP9.9□□□□□ -0.82
SNCA-201ENST00000336904 DUSP10Q9Y6W6 482 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 IGKV6D-41A0A0C4DH26 115 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 POTEFA5A3E0 1075 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 PPIP5K2O43314 1243 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 POTEIP0CG38 1075 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 TRIM21P19474 475 aaKnown RBP9.9□□□□□ -0.82
SNCA-201ENST00000336904 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 PRR16Q569H4 304 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 DACT2Q5SW24 774 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 POTEGQ6S5H5 508 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 KRT26Q7Z3Y9 468 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 GIMAP8Q8ND71 665 aaPredicted RBP9.9□□□□□ -0.82
SNCA-201ENST00000336904 UBXN4Q92575 508 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 DDX12PQ92771 950 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 KIFC2Q96AC6 838 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 DRC1Q96MC2 740 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 CSRNP1Q96S65 589 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 CCSER1Q9C0I3 900 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 L2HGDHQ9H9P8 463 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 ZNF277Q9NRM2 450 aaPredicted RBP9.9□□□□□ -0.82
SNCA-201ENST00000336904 MAGEC2Q9UBF1 373 aaPredicted RBP9.9□□□□□ -0.82
SNCA-201ENST00000336904 LIMA1Q9UHB6 759 aaKnown RBP9.9□□□□□ -0.82
SNCA-201ENST00000336904 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
SNCA-201ENST00000336904 PNMA6FA0A0J9YX94 578 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 A0A1W2PRG0 241 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 CHMP2AO43633 222 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 SRGAP2O75044 1071 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 CLCN6P51797 869 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 KIAA1755Q5JYT7 1200 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 CCDC174Q6PII3 467 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 MB21D1Q8N884 522 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 ANKRD20A12PQ8NF67 263 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 ACER1Q8TDN7 264 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 SMCR8Q8TEV9 937 aaPredicted RBP9.9□□□□□ -0.83
SNCA-201ENST00000336904 LARP4BQ92615 738 aaKnown RBP9.9□□□□□ -0.83
SNCA-201ENST00000336904 P2RX5Q93086 422 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 MTMR9Q96QG7 549 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 CRACR2AQ9BSW2 395 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 PKD2L1Q9P0L9 805 aa9.9□□□□□ -0.83
SNCA-201ENST00000336904 ZHX1Q9UKY1 873 aaPredicted RBP9.9□□□□□ -0.83
SNCA-201ENST00000336904 ZBTB5O15062 677 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 RHOBTB3O94955 611 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 MRPS25P82663 173 aaKnown RBP9.89□□□□□ -0.83
SNCA-201ENST00000336904 PPP2R3AQ06190 1150 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 TBC1D8BQ0IIM8 1120 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 SV2BQ7L1I2 683 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 CUL5Q93034 780 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 NOC4LQ9BVI4 516 aaKnown RBP9.89□□□□□ -0.83
SNCA-201ENST00000336904 TANGO6Q9C0B7 1094 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 MYH4Q9Y623 1939 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 MYH7BA7E2Y1 1941 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 F5H6K3 240 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 TPM1P09493 284 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 DNA2P51530 1060 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 PSMC6P62333 389 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 KLRC3Q07444 240 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 STIM1Q13586 685 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 KIF4BQ2VIQ3 1234 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 RBM26Q5T8P6 1007 aaKnown RBP9.89□□□□□ -0.83
SNCA-201ENST00000336904 NCAPH2Q6IBW4 605 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 DNAAF5Q86Y56 855 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 PSMB7Q99436 277 aa9.89□□□□□ -0.83
SNCA-201ENST00000336904 GLIS2Q9BZE0 524 aaPredicted RBP9.89□□□□□ -0.83
SNCA-201ENST00000336904 REXO2Q9Y3B8 237 aaKnown RBP9.89□□□□□ -0.83
SNCA-201ENST00000336904 PHLPP2Q6ZVD8 1323 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 RASSF10A6NK89 507 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 ZBTB39O15060 712 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 NDUFB10O96000 172 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 SNHG28P0DPA3 235 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 TBC1D10BQ4KMP7 808 aaPredicted RBP9.88□□□□□ -0.83
SNCA-201ENST00000336904 ANKRD13CQ8N6S4 541 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 PANX2Q96RD6 677 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 ZMYND15Q9H091 742 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 CGNQ9P2M7 1197 aaKnown RBP9.88□□□□□ -0.83
SNCA-201ENST00000336904 PCDHA12Q9UN75 941 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 MACROD2A1Z1Q3 448 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 KIF2AO00139 706 aaPredicted RBP9.88□□□□□ -0.83
SNCA-201ENST00000336904 RHOXF2BP0C7M4 288 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 ARID5AQ03989 594 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 TMEM266Q2M3C6 531 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 ABCB5Q2M3G0 1257 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 KRT79Q5XKE5 535 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 GALNT17Q6IS24 598 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 DEFB132Q7Z7B7 95 aa9.88□□□□□ -0.83
SNCA-201ENST00000336904 CNGA4Q8IV77 575 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms