RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ZNF658Q5TYW1 1059 aaPredicted RBP14.12□□□□□ -0.15
LIMK1-201ENST00000336180 SPECC1LQ69YQ0 1117 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 TATDN1Q6P1N9 297 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 TRIML1Q8N9V2 468 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 FGFBP2Q9BYJ0 223 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 KCNJ18B7U540 433 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 MRPL12P52815 198 aaKnown RBP14.12□□□□□ -0.15
LIMK1-201ENST00000336180 KCNJ12Q14500 433 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 CPXCR1Q8N123 301 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 TC2NQ8N9U0 490 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 ANO3Q9BYT9 981 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 TRIM9Q9C026 710 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 EXOC1Q9NV70 894 aa14.12□□□□□ -0.15
LIMK1-201ENST00000336180 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-201ENST00000336180 FXR1P51114 621 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIMK1-201ENST00000336180 NR1I3Q14994 352 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 NCAPH2Q6IBW4 605 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 CCDC150Q8NCX0 1101 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 MYRIPQ8NFW9 859 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 PLIN4Q96Q06 1357 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 MTMR9Q96QG7 549 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 EHD4Q9H223 541 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 BLOC1S4Q9NUP1 217 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 MYH8P13535 1937 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 WNT10BO00744 389 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 FBXO11Q86XK2 927 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 NELFCDQ8IXH7 590 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 DNAI1Q9UI46 699 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 PRR12Q9ULL5 1215 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 KIAA1024Q9UPX6 916 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 POTEFA5A3E0 1075 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 MEIS2O14770 477 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 TPM2P07951 284 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 ERCC5P28715 1186 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-201ENST00000336180 UBXN1Q04323 297 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 POTEEQ6S8J3 1075 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 FEZ1Q99689 392 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 BAG1Q99933 345 aaPredicted RBP14.11□□□□□ -0.15
LIMK1-201ENST00000336180 LZTFL1Q9NQ48 299 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 IMPACTQ9P2X3 320 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 PCDHA12Q9UN75 941 aa14.11□□□□□ -0.15
LIMK1-201ENST00000336180 TNS1Q9HBL0 1735 aaKnown RBP14.1□□□□□ -0.15
LIMK1-201ENST00000336180 ABL1P00519 1130 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 SUPT20HQ8NEM7 779 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 KBTBD4Q9NVX7 518 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 NYAP2Q9P242 653 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 CNTNAP1P78357 1384 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 B4DLN1 442 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 DDX39AO00148 427 aaKnown RBP14.1□□□□□ -0.15
LIMK1-201ENST00000336180 TMEM266Q2M3C6 531 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 IRF2BP1Q8IU81 584 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 PCMTD1Q96MG8 357 aaPredicted RBP14.1□□□□□ -0.15
LIMK1-201ENST00000336180 CCSER1Q9C0I3 900 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 ADD3Q9UEY8 706 aaKnown RBP14.1□□□□□ -0.15
LIMK1-201ENST00000336180 HDAC9Q9UKV0 1011 aa14.1□□□□□ -0.15
LIMK1-201ENST00000336180 FAM86B1E9PN63 330 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ZBTB39O15060 712 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 FAM86B2P0C5J1 330 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 COPB1P53618 953 aaKnown RBP14.09□□□□□ -0.15
LIMK1-201ENST00000336180 PSMC6P62333 389 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 RASA3Q14644 834 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 KRT79Q5XKE5 535 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 KIAA0895Q8NCT3 520 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 PIM2Q9P1W9 311 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ZBTB21Q9ULJ3 1066 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ZNRF3Q9ULT6 936 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 A0A1B0GTH6 734 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 VIL1P09327 827 aaKnown RBP14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ZNF76P36508 570 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 CDKAL1Q5VV42 579 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 PPFIBP1Q86W92 1011 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ADSSL1Q8N142 457 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 CSGALNACT2Q8N6G5 542 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
LIMK1-201ENST00000336180 SH2D3AQ9BRG2 576 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 OPLAHO14841 1288 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 FANCGO15287 622 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ARHGAP4P98171 946 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 TMEM139Q8IV31 216 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ZNF710Q8N1W2 664 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 CCDC155Q8N6L0 562 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 CCDC112Q8NEF3 446 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 LARP4BQ92615 738 aaKnown RBP14.09□□□□□ -0.15
LIMK1-201ENST00000336180 DDX12PQ92771 950 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 GMLQ99445 158 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 AMNQ9BXJ7 453 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 ZNF341Q9BYN7 854 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 IKZF4Q9H2S9 585 aa14.09□□□□□ -0.15
LIMK1-201ENST00000336180 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-201ENST00000336180 SFI1A8K8P3 1242 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms