RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RNF207Q6ZRF8 634 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 NLRP14Q86W24 1093 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 MYLK4Q86YV6 388 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 ASZ1Q8WWH4 475 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TRIM66O15016 1216 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 RAB14P61106 215 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 GRM1Q13255 1194 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 UBN2Q6ZU65 1347 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 GPIHBP1Q8IV16 184 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 CDK19Q9BWU1 502 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 IFNB1P01574 187 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 CHMLP26374 656 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 HSPA13P48723 471 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TNNI2P48788 182 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 SLC4A4Q9Y6R1 1079 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 CTCFP49711 727 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TBCCQ15814 346 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TBC1D1Q86TI0 1168 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TCEANC2Q96MN5 208 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 THUMPD2Q9BTF0 503 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 TMOD3Q9NYL9 352 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 IPO11Q9UI26 975 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
SPTBN1-201ENST00000333896 DNAJC6O75061 913 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 KIF11P52732 1056 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 CHST3Q7LGC8 479 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 AGGF1Q8N302 714 aaeCLIP11.17□□□□□ -0.621e-11■■□□□ 11.7
SPTBN1-201ENST00000333896 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 XPO1O14980 1071 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 SERPINB2P05120 415 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 SERPINB4P48594 390 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 ADKP55263 362 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 RAPGEF5Q92565 580 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 B4DLN1 442 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 H7C1D1 291 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 TSPAN9O75954 239 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 OATP04181 439 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 MRPL12P52815 198 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 MAGEF1Q9HAY2 307 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 GARSP41250 739 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 CYTH2Q99418 400 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 ATXN2Q99700 1313 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 FOXP2O15409 715 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 GGCXP38435 758 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 PPP2R2AP63151 447 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 DDI1Q8WTU0 396 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 ABCB6Q9NP58 842 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 PGRMC1O00264 195 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 SLFN14P0C7P3 912 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 PICALMQ13492 652 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 PFDN6O15212 129 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 ZNF189O75820 626 aaPredicted RBP11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 SERPINB3P29508 390 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 FBXW4P57775 412 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 COG4Q9H9E3 785 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 AP4S1Q9Y587 144 aa11.17□□□□□ -0.62
SPTBN1-201ENST00000333896 PDE4DQ08499 809 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 TLK2Q86UE8 772 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 PKD2L1Q9P0L9 805 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ANAPC5Q9UJX4 755 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 H0Y626 953 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 KCNK3O14649 394 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 TRIM16O95361 564 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 GNA11P29992 359 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 MDM2Q00987 491 aaPredicted RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 EFHD2Q96C19 240 aaPredicted RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 NDEL1Q9GZM8 345 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 PTPN22Q9Y2R2 807 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 FIS1Q9Y3D6 152 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 LDHCP07864 332 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 STX1BP61266 288 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 TSPY1Q01534 308 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 IQCB1Q15051 598 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 NLRP9Q7RTR0 991 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 SRRM1Q8IYB3 904 aaKnown RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 MSL3Q8N5Y2 521 aaKnown RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ATF7P17544 494 aaPredicted RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 ACTN3Q08043 901 aaPredicted RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 SPARCL1Q14515 664 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 RAB44Q7Z6P3 723 aaPredicted RBP11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 TRIM50Q86XT4 487 aa11.16□□□□□ -0.62
SPTBN1-201ENST00000333896 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms