RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 RGS22Q8NE09 1264 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 NAPGQ99747 312 aaPredicted RBP10.54□□□□□ -0.72
SS18L1-201ENST00000331758 IMPG2Q9BZV3 1241 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 POLD4Q9HCU8 107 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 STK17AQ9UEE5 414 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 COL4A3BPQ9Y5P4 624 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
SS18L1-201ENST00000331758 KLHL30Q0D2K2 578 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 ELF2Q15723 593 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 RCSD1Q6JBY9 416 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 IFT74Q96LB3 600 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 CALCOCO1Q9P1Z2 691 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 GINS2Q9Y248 185 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 MYO3BQ8WXR4 1341 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 TMEM110-MUSTN1A8MSY1 372 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 XRCC5P13010 732 aaKnown RBP10.54□□□□□ -0.72
SS18L1-201ENST00000331758 RNASE9P60153 205 aaKnown RBP10.54□□□□□ -0.72
SS18L1-201ENST00000331758 DDR1Q08345 913 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 NTRK3Q16288 839 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 GPR162Q16538 588 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 GADL1Q6ZQY3 521 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 DHTKD1Q96HY7 919 aaPredicted RBP10.54□□□□□ -0.72
SS18L1-201ENST00000331758 FNBP1Q96RU3 617 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 OGFRQ9NZT2 677 aa10.54□□□□□ -0.72
SS18L1-201ENST00000331758 MRC1P22897 1456 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 RBL2Q08999 1139 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 SEC23AQ15436 765 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 ODR4Q5SWX8 454 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 HHIPL2Q6UWX4 724 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 DCPSQ96C86 337 aaKnown RBP10.53□□□□□ -0.72
SS18L1-201ENST00000331758 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
SS18L1-201ENST00000331758 PCDHA6Q9UN73 950 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 PCDHA8Q9Y5H6 950 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 TRIM49BA6NDI0 452 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 STX10O60499 249 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 EIF2AK2P19525 551 aaKnown RBP10.53□□□□□ -0.72
SS18L1-201ENST00000331758 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 ASIC2Q16515 512 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 SARM1Q6SZW1 724 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 VSTM4Q8IW00 320 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 KRT222Q8N1A0 295 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 SMCR8Q8TEV9 937 aaPredicted RBP10.53□□□□□ -0.72
SS18L1-201ENST00000331758 CCDC51Q96ER9 411 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 LSM14BQ9BX40 385 aaKnown RBP10.53□□□□□ -0.72
SS18L1-201ENST00000331758 PLA2G4BP0C869 781 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 PDHBP11177 359 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 CCNE1P24864 410 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 ARHGAP44Q17R89 818 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 CACNA1FO60840 1977 aa10.53□□□□□ -0.72
SS18L1-201ENST00000331758 DKC1O60832 514 aaKnown RBP eCLIP10.52□□□□□ -0.72
SS18L1-201ENST00000331758 FAM102BQ5T8I3 360 aa10.52□□□□□ -0.72
SS18L1-201ENST00000331758 KRT26Q7Z3Y9 468 aa10.52□□□□□ -0.72
SS18L1-201ENST00000331758 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.72
SS18L1-201ENST00000331758 BHMT2Q9H2M3 363 aa10.52□□□□□ -0.72
SS18L1-201ENST00000331758 RWDD2AQ9UIY3 292 aa10.52□□□□□ -0.72
SS18L1-201ENST00000331758 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.72
SS18L1-201ENST00000331758 IVNS1ABPQ9Y6Y0 642 aa10.52□□□□□ -0.72
SS18L1-201ENST00000331758 TOPAZ1Q8N9V7 1692 aa10.52□□□□□ -0.72
SS18L1-201ENST00000331758 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 NR2F2P24468 414 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 ARHGAP4P98171 946 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 IQCB1Q15051 598 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 GNPTABQ3T906 1256 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 ENGASEQ8NFI3 743 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 IFIH1Q9BYX4 1025 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 PSDA5PKW4 1024 aaPredicted RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 EEF1GP26641 437 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 FKBP3Q00688 224 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 KRT31Q15323 416 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 NCAPG2Q86XI2 1143 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 DHX40Q8IX18 779 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 GLG1Q92896 1179 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 EPN1Q9Y6I3 576 aaPredicted RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 K7ENM7 598 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 MYL1P05976 194 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 PRCPP42785 496 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 POLR2FP61218 127 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 SPP2Q13103 211 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 VWA3BQ502W6 1294 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 TAX1BP1Q86VP1 789 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 ANKRD13CQ8N6S4 541 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 DDX12PQ92771 950 aa10.52□□□□□ -0.73
SS18L1-201ENST00000331758 SECISBP2LQ93073 1101 aaKnown RBP10.52□□□□□ -0.73
SS18L1-201ENST00000331758 SETD1AO15047 1707 aaKnown RBP10.51□□□□□ -0.73
SS18L1-201ENST00000331758 NDUFB10O96000 172 aa10.51□□□□□ -0.73
SS18L1-201ENST00000331758 TNFAIP3P21580 790 aa10.51□□□□□ -0.73
SS18L1-201ENST00000331758 GJC1P36383 396 aa10.51□□□□□ -0.73
SS18L1-201ENST00000331758 GABPB1Q06547 395 aaPredicted RBP10.51□□□□□ -0.73
SS18L1-201ENST00000331758 CTTNQ14247 550 aaKnown RBP10.51□□□□□ -0.73
SS18L1-201ENST00000331758 GRIK5Q16478 980 aa10.51□□□□□ -0.73
SS18L1-201ENST00000331758 DPH6Q7L8W6 267 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms