RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 GRK4P32298 578 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 NLRP5P59047 1200 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 GALNT17Q6IS24 598 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 TINF2Q9BSI4 451 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 PXMP2Q9NR77 195 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 PCDHA4Q9UN74 947 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 KCNJ14Q9UNX9 436 aa18.41■□□□□ 0.54
LRRC28-202ENST00000331450 AP3B2Q13367 1082 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 FCHSD1Q86WN1 690 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
LRRC28-202ENST00000331450 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 NSUN6Q8TEA1 469 aaKnown RBP18.4■□□□□ 0.54
LRRC28-202ENST00000331450 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 MCOLN1Q9GZU1 580 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 TMEM260Q9NX78 707 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
LRRC28-202ENST00000331450 ASB14A6NK59 587 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
LRRC28-202ENST00000331450 MMP1P03956 469 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 TRIM32Q13049 653 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 KRT40Q6A162 431 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 FAM184AQ8NB25 1140 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 PDCD2LQ9BRP1 358 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 KIF3AQ9Y496 699 aa18.39■□□□□ 0.53
LRRC28-202ENST00000331450 DDX49Q9Y6V7 483 aaKnown RBP18.39■□□□□ 0.53
LRRC28-202ENST00000331450 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
LRRC28-202ENST00000331450 CYBAP13498 195 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 EIF2AK2P19525 551 aaKnown RBP18.38■□□□□ 0.53
LRRC28-202ENST00000331450 CYP2C19P33261 490 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 PGM5Q15124 567 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
LRRC28-202ENST00000331450 ARHGEF16Q5VV41 709 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 FBXO18Q8NFZ0 1043 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 RASGRP4Q8TDF6 673 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 SH3TC2Q8TF17 1288 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 CRYGNQ8WXF5 182 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 ARMC5Q96C12 935 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 C8orf76Q96K31 380 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
LRRC28-202ENST00000331450 BIN2Q9UBW5 565 aaPredicted RBP18.38■□□□□ 0.53
LRRC28-202ENST00000331450 PCDHA6Q9UN73 950 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 PCDHA8Q9Y5H6 950 aa18.38■□□□□ 0.53
LRRC28-202ENST00000331450 SPDYE3A6NKU9 549 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 INHAP05111 366 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 FOSBP53539 338 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 CACNB2Q08289 660 aaPredicted RBP18.37■□□□□ 0.53
LRRC28-202ENST00000331450 JAKMIP3Q5VZ66 844 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 MFSD14CQ5VZR4 134 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 TNFRSF25Q93038 417 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 NRBP1Q9UHY1 535 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 MYH15Q9Y2K3 1946 aa18.37■□□□□ 0.53
LRRC28-202ENST00000331450 NR3C2P08235 984 aa18.36■□□□□ 0.53
LRRC28-202ENST00000331450 SREBF1P36956 1147 aa18.36■□□□□ 0.53
LRRC28-202ENST00000331450 UBXN2AP68543 259 aa18.36■□□□□ 0.53
LRRC28-202ENST00000331450 TRIM29Q14134 588 aa18.36■□□□□ 0.53
LRRC28-202ENST00000331450 TRPV1Q8NER1 839 aa18.36■□□□□ 0.53
LRRC28-202ENST00000331450 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
LRRC28-202ENST00000331450 MPHOSPH6Q99547 160 aaKnown RBP18.36■□□□□ 0.53
LRRC28-202ENST00000331450 DOCK5Q9H7D0 1870 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 B4DLN1 442 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 ZNF865P0CJ78 1059 aaPredicted RBP18.35■□□□□ 0.53
LRRC28-202ENST00000331450 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
LRRC28-202ENST00000331450 KRT2P35908 639 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 MRPS9P82933 396 aaKnown RBP18.35■□□□□ 0.53
LRRC28-202ENST00000331450 GUCY1B3Q02153 619 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 PDE4DQ08499 809 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 DIS3L2Q8IYB7 885 aaKnown RBP18.35■□□□□ 0.53
LRRC28-202ENST00000331450 ZNF333Q96JL9 665 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 ABHD16BQ9H3Z7 469 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 EHMT1Q9H9B1 1298 aa18.35■□□□□ 0.53
LRRC28-202ENST00000331450 NR5A1Q13285 461 aa18.34■□□□□ 0.53
LRRC28-202ENST00000331450 BECN1Q14457 450 aa18.34■□□□□ 0.53
LRRC28-202ENST00000331450 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
LRRC28-202ENST00000331450 VTA1Q9NP79 307 aa18.34■□□□□ 0.53
LRRC28-202ENST00000331450 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
LRRC28-202ENST00000331450 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
LRRC28-202ENST00000331450 BTBD18B2RXH4 712 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 RGS20O76081 388 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 CCND2P30279 289 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 ARHGAP4P98171 946 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 STXBP2Q15833 593 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 PRAMEF19Q5SWL8 479 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 TAPT1Q6NXT6 567 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 FBXO16Q8IX29 292 aaPredicted RBP18.33■□□□□ 0.52
LRRC28-202ENST00000331450 BRMS1Q9HCU9 246 aa18.33■□□□□ 0.52
LRRC28-202ENST00000331450 RBM47A0AV96 593 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms