RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RASA1P20936 1047 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 NUCB1Q02818 461 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 SHROOM1Q2M3G4 852 aaPredicted RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 MAP3K21Q5TCX8 1036 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 UBE2Q1Q7Z7E8 422 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ABRAQ8N0Z2 381 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ACER1Q8TDN7 264 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 GTPBP3Q969Y2 492 aaKnown RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 ACDQ96AP0 544 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 CALR3Q96L12 384 aaKnown RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 APBA2Q99767 749 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 RPAP3Q9H6T3 665 aaPredicted RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 EPB41L4AQ9HCS5 686 aaPredicted RBP7.54□□□□□ -1.2
SMG1-201ENST00000330588 TXNRD2Q9NNW7 524 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ANAPC4Q9UJX5 808 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 ADAMTS5Q9UNA0 930 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
SMG1-201ENST00000330588 M0R2C6 588 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 MPHOSPH10O00566 681 aaKnown RBP7.53□□□□□ -1.2
SMG1-201ENST00000330588 CNMDO75829 334 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 INHAP05111 366 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
SMG1-201ENST00000330588 RGS2P41220 211 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 MFAP1P55081 439 aaKnown RBP7.53□□□□□ -1.2
SMG1-201ENST00000330588 PDE4BQ07343 736 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 GPR142Q7Z601 462 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 PLEKHH3Q7Z736 793 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 CHD1LQ86WJ1 897 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 IFNL3Q8IZI9 196 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 SLC44A5Q8NCS7 719 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 MKL1Q969V6 931 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 DYNLL2Q96FJ2 89 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
SMG1-201ENST00000330588 RPTORQ8N122 1335 aa7.52□□□□□ -1.2
SMG1-201ENST00000330588 HIP1O00291 1037 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 SGPL1O95470 568 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 SLC25A27O95847 323 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 IGHA2P01877 340 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 THBS1P07996 1170 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 FGRP09769 529 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 EEF2P13639 858 aaKnown RBP7.52□□□□□ -1.21
SMG1-201ENST00000330588 EN2P19622 333 aaPredicted RBP7.52□□□□□ -1.21
SMG1-201ENST00000330588 TDO2P48775 406 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 GRB14Q14449 540 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 TSHZ3Q63HK5 1081 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 GMCL1P1Q8NEA9 526 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
SMG1-201ENST00000330588 SHISA4Q96DD7 197 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
SMG1-201ENST00000330588 RNF208Q9H0X6 261 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 NAPBQ9H115 298 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 MROH8Q9H579 483 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 MKNK2Q9HBH9 465 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
SMG1-201ENST00000330588 CYP2D7A0A087X1C5 515 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 ATP2A1O14983 1001 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 ORC4O43929 436 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 PLA2G6O60733 806 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 F11P03951 625 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 CHGBP05060 677 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 NOVP48745 357 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 PPARAQ07869 468 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 MTFR1Q15390 333 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
SMG1-201ENST00000330588 MCMDC2Q4G0Z9 681 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 OLFML2BQ68BL8 750 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 TAS1R3Q7RTX0 852 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 PLEKHM2Q8IWE5 1019 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 CCAR1Q8IX12 1150 aaKnown RBP7.51□□□□□ -1.21
SMG1-201ENST00000330588 ZNF444Q8N0Y2 327 aaPredicted RBP7.51□□□□□ -1.21
SMG1-201ENST00000330588 NEDD1Q8NHV4 660 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 U2AF1L4Q8WU68 220 aaKnown RBP7.51□□□□□ -1.21
SMG1-201ENST00000330588 YTHDC1Q96MU7 727 aaKnown RBP7.51□□□□□ -1.21
SMG1-201ENST00000330588 TRERF1Q96PN7 1200 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 HTATIP2Q9BUP3 242 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 SPATC1LQ9H0A9 340 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 PORCNQ9H237 461 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 TIMMDC1Q9NPL8 285 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 SLC5A4Q9NY91 659 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 MTMR4Q9NYA4 1195 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 BTBD7Q9P203 1132 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
SMG1-201ENST00000330588 NRBP1Q9UHY1 535 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMG1-201ENST00000330588 DOCK3Q8IZD9 2030 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 MYH4Q9Y623 1939 aa7.51□□□□□ -1.21
SMG1-201ENST00000330588 LAMA4Q16363 1823 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 FOXP2O15409 715 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 MSCO60682 206 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 TTLL1O95922 423 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 IL2RAP01589 272 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 APPP05067 770 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 ELNP15502 786 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 ZKSCAN1P17029 563 aaPredicted RBP7.5□□□□□ -1.21
SMG1-201ENST00000330588 SOX11P35716 441 aa7.5□□□□□ -1.21
SMG1-201ENST00000330588 RCSD1Q6JBY9 416 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms