RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 PAWRQ96IZ0 340 aaKnown RBP21.82■■□□□ 1.08
MRPL54-201ENST00000330133 SLKQ9H2G2 1235 aaPredicted RBP21.82■■□□□ 1.08
MRPL54-201ENST00000330133 PXMP2Q9NR77 195 aa21.82■■□□□ 1.08
MRPL54-201ENST00000330133 DUSP11O75319 330 aaKnown RBP21.81■■□□□ 1.08
MRPL54-201ENST00000330133 IFNAR1P17181 557 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 NAPAP54920 295 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 STXBP2Q15833 593 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 NTRK3Q16288 839 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 TAPT1Q6NXT6 567 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 DIS3LQ8TF46 1054 aaKnown RBP21.81■■□□□ 1.08
MRPL54-201ENST00000330133 SLC26A6Q9BXS9 759 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 PDGFCQ9NRA1 345 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 TPCN1Q9ULQ1 816 aa21.81■■□□□ 1.08
MRPL54-201ENST00000330133 KBTBD13C9JR72 458 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 NR3C2P08235 984 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 SCG2P13521 617 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 ADCYAP1R1P41586 468 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 RBM25P49756 843 aaKnown RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 MNX1P50219 401 aaPredicted RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 SSRP1Q08945 709 aaKnown RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 PFKFB3Q16875 520 aaPredicted RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 GJC2Q5T442 439 aaPredicted RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 PPP1R18Q6NYC8 613 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 RNF180Q86T96 592 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 TRIM22Q8IYM9 498 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 PHKBQ93100 1093 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 LENG1Q96BZ8 264 aaPredicted RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 RNF26Q9BY78 433 aaPredicted RBP21.8■■□□□ 1.08
MRPL54-201ENST00000330133 C11orf49Q9H6J7 331 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 SPC25Q9HBM1 224 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 BARHL2Q9NY43 387 aa21.8■■□□□ 1.08
MRPL54-201ENST00000330133 MYH6P13533 1939 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 STXBP3O00186 592 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 PIK3CDO00329 1044 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 DNM1LO00429 736 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 PGK1P00558 417 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 LRRC41Q15345 812 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 USP17L6PQ6QN14 398 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 PDCD2LQ9BRP1 358 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 HTATIP2Q9BUP3 242 aa21.79■■□□□ 1.08
MRPL54-201ENST00000330133 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.78■■□□□ 1.08
MRPL54-201ENST00000330133 RBM47A0AV96 593 aaKnown RBP21.78■■□□□ 1.08
MRPL54-201ENST00000330133 MEIS2O14770 477 aa21.78■■□□□ 1.08
MRPL54-201ENST00000330133 PFKFB2O60825 505 aa21.78■■□□□ 1.08
MRPL54-201ENST00000330133 EIF3JO75822 258 aaKnown RBP21.78■■□□□ 1.08
MRPL54-201ENST00000330133 MYCLP12524 364 aaPredicted RBP21.78■■□□□ 1.08
MRPL54-201ENST00000330133 WDR11Q9BZH6 1224 aa21.78■■□□□ 1.08
MRPL54-201ENST00000330133 AP5M1Q9H0R1 490 aa21.78■■□□□ 1.08
MRPL54-201ENST00000330133 GLT8D2Q9H1C3 349 aa21.78■■□□□ 1.08
MRPL54-201ENST00000330133 SMCO2A6NFE2 343 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 PPFIA3O75145 1194 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 CDKL5O76039 1030 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 SMPD1P17405 629 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 CCND2P30279 289 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 ADCY7P51828 1080 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 SCRN1Q12765 414 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 PGM5Q15124 567 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 TEX2Q8IWB9 1127 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 SCFD2Q8WU76 684 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 CCDC12Q8WUD4 166 aaPredicted RBP21.77■■□□□ 1.08
MRPL54-201ENST00000330133 RIC8AQ9NPQ8 531 aa21.77■■□□□ 1.08
MRPL54-201ENST00000330133 SYNRGQ9UMZ2 1314 aa21.77■■□□□ 1.07
MRPL54-201ENST00000330133 DYNC1LI2O43237 492 aaPredicted RBP21.76■■□□□ 1.07
MRPL54-201ENST00000330133 ADCY6O43306 1168 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 GJA9P57773 515 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 PKN1Q16512 942 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 UBE2SQ16763 222 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 DUSP28Q4G0W2 176 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 SEPT14Q6ZU15 432 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 VSIG10LQ86VR7 867 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 KIF2CQ99661 725 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 SENP6Q9GZR1 1112 aaPredicted RBP21.76■■□□□ 1.07
MRPL54-201ENST00000330133 UPF3AQ9H1J1 476 aaKnown RBP21.76■■□□□ 1.07
MRPL54-201ENST00000330133 GNEQ9Y223 722 aaKnown RBP21.76■■□□□ 1.07
MRPL54-201ENST00000330133 Q9Y3F1 56 aa21.76■■□□□ 1.07
MRPL54-201ENST00000330133 LCTP09848 1927 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 SPDYE3A6NKU9 549 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 NKRFO15226 690 aaKnown RBP eCLIP21.75■■□□□ 1.07
MRPL54-201ENST00000330133 ADAMTS4O75173 837 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 C6orf222P0C671 652 aaPredicted RBP21.75■■□□□ 1.07
MRPL54-201ENST00000330133 COL6A1P12109 1028 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 TTLL4Q14679 1199 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 TYW1BQ6NUM6 668 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 TLK2Q86UE8 772 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 DPF3Q92784 378 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 TSEN34Q9BSV6 310 aaKnown RBP21.75■■□□□ 1.07
MRPL54-201ENST00000330133 EHMT1Q9H9B1 1298 aa21.75■■□□□ 1.07
MRPL54-201ENST00000330133 TXNP10599 105 aaKnown RBP21.74■■□□□ 1.07
MRPL54-201ENST00000330133 RABEP1Q15276 862 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 ME3Q16798 604 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 KLHDC9Q8NEP7 349 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 C6orf50Q9HD87 102 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 PCDHA6Q9UN73 950 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 LIMCH1Q9UPQ0 1083 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 PCDHA8Q9Y5H6 950 aa21.74■■□□□ 1.07
MRPL54-201ENST00000330133 DEXIO95424 95 aa21.73■■□□□ 1.07
MRPL54-201ENST00000330133 FOSP01100 380 aaPredicted RBP21.73■■□□□ 1.07
MRPL54-201ENST00000330133 GNASQ5JWF2 1037 aa21.73■■□□□ 1.07
MRPL54-201ENST00000330133 XRRA1Q6P2D8 792 aa21.73■■□□□ 1.07
MRPL54-201ENST00000330133 NECAB1Q8N987 351 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms