RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ACBD3Q9H3P7 528 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
BRCC3-201ENST00000330045 LRRIQ3A6PVS8 624 aaPredicted RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 MCM3P25205 808 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 CDK17Q00537 523 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 CKAP4Q07065 602 aaKnown RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 HSP90B2PQ58FF3 399 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 NEDD1Q8NHV4 660 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 CAPZA3Q96KX2 299 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 RTFDC1Q9BY42 306 aaPredicted RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 TNS1Q9HBL0 1735 aaKnown RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 KIAA0895Q8NCT3 520 aa17.12■□□□□ 0.33
BRCC3-201ENST00000330045 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
BRCC3-201ENST00000330045 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 BTDP43251 543 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 SV2BQ7L1I2 683 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 HPS3Q969F9 1004 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 PURBQ96QR8 312 aaKnown RBP17.11■□□□□ 0.33
BRCC3-201ENST00000330045 SEMA6BQ9H3T3 888 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
BRCC3-201ENST00000330045 DUSP10Q9Y6W6 482 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 TXKP42681 527 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
BRCC3-201ENST00000330045 CENPPQ6IPU0 288 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 CERS3Q8IU89 383 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 GOLGA5Q8TBA6 731 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 IQCDQ96DY2 449 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 CCDC42Q96M95 316 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 PIGSQ96S52 555 aa17.11■□□□□ 0.33
BRCC3-201ENST00000330045 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
BRCC3-201ENST00000330045 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.33
BRCC3-201ENST00000330045 VAV2P52735 878 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 MAP9Q49MG5 647 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 REXO1Q8N1G1 1221 aaKnown RBP17.1■□□□□ 0.33
BRCC3-201ENST00000330045 TSGA10Q9BZW7 698 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 MED4Q9NPJ6 270 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 IDEP14735 1019 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 SPA17Q15506 151 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 TEX11Q8IYF3 940 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 NLGN1Q8N2Q7 840 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
BRCC3-201ENST00000330045 VIPAS39Q9H9C1 493 aa17.1■□□□□ 0.33
BRCC3-201ENST00000330045 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
BRCC3-201ENST00000330045 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
BRCC3-201ENST00000330045 ACTN2P35609 894 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 CEP95Q96GE4 821 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 TMEM260Q9NX78 707 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 TULP2O00295 520 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 GRB10Q13322 594 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 C15orf52Q6ZUT6 534 aaKnown RBP17.09■□□□□ 0.33
BRCC3-201ENST00000330045 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 STK17AQ9UEE5 414 aa17.09■□□□□ 0.33
BRCC3-201ENST00000330045 GPR75-ASB3A0A0A6YYF3 556 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 ESYT2A0FGR8 921 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 MYMKA6NI61 221 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 ZNF263O14978 683 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 RIMBP2O15034 1052 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 ZNF185O15231 689 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 PHACTR2O75167 634 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 CAPN2P17655 700 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 HNRNPH3P31942 346 aaKnown RBP17.08■□□□□ 0.33
BRCC3-201ENST00000330045 CALCRLQ16602 461 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 UNC13DQ70J99 1090 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 TBC1D16Q8TBP0 767 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 NDST4Q9H3R1 872 aa17.08■□□□□ 0.33
BRCC3-201ENST00000330045 CWC15Q9P013 229 aaKnown RBP17.08■□□□□ 0.33
BRCC3-201ENST00000330045 USO1O60763 962 aaKnown RBP17.08■□□□□ 0.32
BRCC3-201ENST00000330045 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.32
BRCC3-201ENST00000330045 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
BRCC3-201ENST00000330045 RAD51AP2Q09MP3 1159 aa17.08■□□□□ 0.32
BRCC3-201ENST00000330045 CCDC96Q2M329 555 aa17.08■□□□□ 0.32
BRCC3-201ENST00000330045 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.32
BRCC3-201ENST00000330045 KRT26Q7Z3Y9 468 aa17.08■□□□□ 0.32
BRCC3-201ENST00000330045 LARP4BQ92615 738 aaKnown RBP17.08■□□□□ 0.32
BRCC3-201ENST00000330045 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.32
BRCC3-201ENST00000330045 GGA1Q9UJY5 639 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms