RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
TSPO-201ENST00000329563 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
TSPO-201ENST00000329563 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
TSPO-201ENST00000329563 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
TSPO-201ENST00000329563 SLC43A3Q8NBI5 491 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
TSPO-201ENST00000329563 Q9Y3F1 56 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 MYH6P13533 1939 aa17.11■□□□□ 0.33
TSPO-201ENST00000329563 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
TSPO-201ENST00000329563 ARIH2O95376 493 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 CD4P01730 458 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 FOSL2P15408 326 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 PSMC6P62333 389 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 KRT32Q14532 448 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
TSPO-201ENST00000329563 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
TSPO-201ENST00000329563 COPS5Q92905 334 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 WDR11Q9BZH6 1224 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 ABCB11O95342 1321 aa17.1■□□□□ 0.33
TSPO-201ENST00000329563 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
TSPO-201ENST00000329563 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
TSPO-201ENST00000329563 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
TSPO-201ENST00000329563 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
TSPO-201ENST00000329563 KCNB2Q92953 911 aa17.09■□□□□ 0.33
TSPO-201ENST00000329563 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
TSPO-201ENST00000329563 TTC28Q96AY4 2481 aa17.08■□□□□ 0.33
TSPO-201ENST00000329563 B4DLN1 442 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
TSPO-201ENST00000329563 SLC27A2O14975 620 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 CYTH3O43739 400 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
TSPO-201ENST00000329563 DNAJB2P25686 324 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 MRPL12P52815 198 aaKnown RBP17.08■□□□□ 0.32
TSPO-201ENST00000329563 PDE4DQ08499 809 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 TROAPQ12815 778 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 ITGA7Q13683 1181 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 GRM4Q14833 912 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 C16orf59Q7L2K0 433 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.32
TSPO-201ENST00000329563 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
TSPO-201ENST00000329563 UMODL1Q5DID0 1318 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 TRDNQ13061 729 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 BRDTQ58F21 947 aaPredicted RBP17.07■□□□□ 0.32
TSPO-201ENST00000329563 PPP1R13LQ8WUF5 828 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 MYLIPQ8WY64 445 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSPO-201ENST00000329563 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 PRUNE2Q8WUY3 3088 aa17.07■□□□□ 0.32
TSPO-201ENST00000329563 ZBTB5O15062 677 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 PSMA5P28066 241 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 HSD17B4P51659 736 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
TSPO-201ENST00000329563 GHRHRQ02643 423 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 CCDC62Q6P9F0 684 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 TIFAQ96CG3 184 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 PIGSQ96S52 555 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 PPP1R12CQ9BZL4 782 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 TRPV6Q9H1D0 765 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 RIOX1Q9H6W3 641 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 POLR3EQ9NVU0 708 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 KIAA1217Q5T5P2 1943 aa17.06■□□□□ 0.32
TSPO-201ENST00000329563 B4GALT4O60513 344 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
TSPO-201ENST00000329563 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
TSPO-201ENST00000329563 CSF2RAP15509 400 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 CPT1AP50416 773 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 WTAPQ15007 396 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 PPP2R5BQ15173 497 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 TMEM240Q5SV17 173 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
TSPO-201ENST00000329563 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 AMNQ9BXJ7 453 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 HIPK3Q9H422 1215 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 IL23AQ9NPF7 189 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 MRPL11Q9Y3B7 192 aaKnown RBP17.05■□□□□ 0.32
TSPO-201ENST00000329563 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
TSPO-201ENST00000329563 CFBP00751 764 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 EIF2AK2P19525 551 aaKnown RBP17.04■□□□□ 0.32
TSPO-201ENST00000329563 CYP2C18P33260 490 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 RAB30Q15771 203 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 HOMER1Q86YM7 354 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
TSPO-201ENST00000329563 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
TSPO-201ENST00000329563 MAF1Q9H063 256 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms