RNA–Protein interactions for RNA: ENST00000327892.12

TUBB-205, Transcript of tubulin beta class I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB, Length 2,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-205ENST00000327892 KCNB1Q14721 858 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 CEP85LQ5SZL2 805 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
TUBB-205ENST00000327892 MAATS1Q7Z4T9 603 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 IFT20Q8IY31 132 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 CASKIN2Q8WXE0 1202 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 PIGBQ92521 554 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 DHTKD1Q96HY7 919 aaPredicted RBP11.25□□□□□ -0.61
TUBB-205ENST00000327892 KANSL2Q9H9L4 492 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 NLRC4Q9NPP4 1024 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
TUBB-205ENST00000327892 CAMTA1Q9Y6Y1 1673 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
TUBB-205ENST00000327892 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 TRAPPC10P48553 1259 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ASIC1P78348 528 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ITIH3Q06033 890 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 PFKFB3Q16875 520 aaPredicted RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 TXNRD1Q16881 649 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 CCDC40Q4G0X9 1142 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 KDM7AQ6ZMT4 941 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ZNF572Q7Z3I7 529 aaPredicted RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 DDX42Q86XP3 938 aaKnown RBP eCLIP11.24□□□□□ -0.61
TUBB-205ENST00000327892 CEP57Q86XR8 500 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 KLHL7Q8IXQ5 586 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ERGIC2Q96RQ1 377 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 MTA3Q9BTC8 594 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 TRIM9Q9C026 710 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 TMOD3Q9NYL9 352 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 DNM1LO00429 736 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 CYP2D6P10635 497 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 MMP14P50281 582 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 SETQ01105 290 aaPredicted RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 ARID5AQ03989 594 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 EHHADHQ08426 723 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 CFAP221Q4G0U5 840 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ZSCAN29Q8IWY8 852 aaPredicted RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 KIAA0895Q8NCT3 520 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 ALS2CR12Q96Q35 445 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 PYM1Q9BRP8 204 aaKnown RBP11.24□□□□□ -0.61
TUBB-205ENST00000327892 GOLPH3Q9H4A6 298 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 BCCIPQ9P287 314 aaKnown RBP eCLIP11.24□□□□□ -0.61
TUBB-205ENST00000327892 PLAAQ9Y263 795 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
TUBB-205ENST00000327892 PALMO75781 387 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 STARD3NLO95772 234 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 PDHBP11177 359 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 SCP2P22307 547 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 CDK17Q00537 523 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 QPCTQ16769 361 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
TUBB-205ENST00000327892 KIRREL3Q8IZU9 778 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 GLIS3Q8NEA6 775 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 ZNF384Q8TF68 577 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 RIOK1Q9BRS2 568 aaKnown RBP11.23□□□□□ -0.61
TUBB-205ENST00000327892 CPVLQ9H3G5 476 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 SIK3Q9Y2K2 1263 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.23□□□□□ -0.61
TUBB-205ENST00000327892 CCDC194A0A1B0GVG4 234 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 DDR1Q08345 913 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 ITGB3BPQ13352 177 aaPredicted RBP11.23□□□□□ -0.61
TUBB-205ENST00000327892 VWA3BQ502W6 1294 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 TDRD12Q587J7 1177 aaKnown RBP11.23□□□□□ -0.61
TUBB-205ENST00000327892 ATP6V1G3Q96LB4 118 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 SLC40A1Q9NP59 571 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 CEP83Q9Y592 693 aa11.23□□□□□ -0.61
TUBB-205ENST00000327892 RASSF9O75901 435 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 HNRNPH3P31942 346 aaKnown RBP11.22□□□□□ -0.61
TUBB-205ENST00000327892 TECP42680 631 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 LRRC41Q15345 812 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 DYMQ7RTS9 669 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 NOX5Q96PH1 765 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 TNS3Q68CZ2 1445 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 CHD4Q14839 1912 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 KCPQ6ZWJ8 1503 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 A0A1W2PQJ5 194 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 CHUKO15111 745 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 RAD51CO43502 376 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 FAM107AO95990 144 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 KLRC1P26715 233 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 HLTFQ14527 1009 aaKnown RBP eCLIP11.22□□□□□ -0.61
TUBB-205ENST00000327892 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 FAM228AQ86W67 206 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 BAP1Q92560 729 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 PACSIN1Q9BY11 444 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 VCPKMTQ9H867 229 aa11.22□□□□□ -0.61
TUBB-205ENST00000327892 LRRC4CQ9HCJ2 640 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms