RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	NLRX1	Q86UT6	975 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	SLC51A	Q86UW1	340 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	NAP1L4	Q99733	375 aa	Known RBP	13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	BARHL2	Q9NY43	387 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	XRCC5	P13010	732 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	TNFAIP3	P21580	790 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	NF2	P35240	595 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	EARS2	Q5JPH6	523 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	SP8	Q8IXZ3	490 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	VGLL2	Q8N8G2	317 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	ENGASE	Q8NFI3	743 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	DHX36	Q9H2U1	1008 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	SUGCT	Q9HAC7	445 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	RABGAP1	Q9Y3P9	1069 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	PSD	A5PKW4	1024 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	SFMBT2	Q5VUG0	894 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	CDC42EP5	Q6NZY7	148 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	PAF1	Q8N7H5	531 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	DDX12P	Q92771	950 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	FNBP1	Q96RU3	617 aa		13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	MRPL11	Q9Y3B7	192 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-223	ENST00000324771	CEP104	O60308	925 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	STX10	O60499	249 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	TAL1	P17542	331 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	MKRN3	Q13064	507 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	TRIM14	Q14142	442 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	TMC4	Q7Z404	712 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	CCDC25	Q86WR0	208 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	SYNC	Q9H7C4	482 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	MYO1A	Q9UBC5	1043 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	DLAT	P10515	647 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	IRX3	P78415	501 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	TOGARAM2	Q6ZUX3	1019 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	COL23A1	Q86Y22	540 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	ZNF577	Q9BSK1	485 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	KCNQ5	Q9NR82	932 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	MTMR4	Q9NYA4	1195 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	CWC15	Q9P013	229 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	POTEF	A5A3E0	1075 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	ANKRD62	A6NC57	917 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	ZBTB5	O15062	677 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	PLA2G4B	P0C869	781 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	POTEI	P0CG38	1075 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	TOB1	P50616	345 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	POTEG	Q6S5H5	508 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	POTEE	Q6S8J3	1075 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	ANKRD35	Q8N283	1001 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	U2AF1L4	Q8WU68	220 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	PHF20	Q9BVI0	1012 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	PCDHA6	Q9UN73	950 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	PCDHA8	Q9Y5H6	950 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	TNS2	Q63HR2	1409 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771		K7ENM7	598 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	CALU	O43852	315 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	SEC31A	O94979	1220 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	RASSF7	Q02833	373 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	NTRK3	Q16288	839 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	ARMCX5	Q6P1M9	558 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	GLG1	Q92896	1179 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	ATP6V0A2	Q9Y487	856 aa		13.07	□□□□□ -0.32
DDR1-223	ENST00000324771	SMTN	P53814	917 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	PLCB3	Q01970	1234 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	TNFAIP1	Q13829	316 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	TICAM2	Q86XR7	235 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	CNTNAP4	Q9C0A0	1308 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	PPP1R2	P41236	205 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	SLC27A3	Q5K4L6	730 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	GADL1	Q6ZQY3	521 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	NUP58	Q9BVL2	599 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	PEAK1	Q9H792	1746 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	PDE4DIP	Q5VU43	2346 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	NOP56	O00567	594 aa	Known RBP	13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	LRRN2	O75325	713 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	CETN2	P41208	172 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	NAA35	Q5VZE5	725 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	CIAPIN1	Q6FI81	312 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	SLC30A10	Q6XR72	485 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	ILDR1	Q86SU0	546 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	HOOK2	Q96ED9	719 aa		13.06	□□□□□ -0.32
DDR1-223	ENST00000324771	RERE	Q9P2R6	1566 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	POTEB2	H3BUK9	544 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	ATP2C2	O75185	946 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	CCDC172	P0C7W6	258 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	CCNE1	P24864	410 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	ATP2C1	P98194	919 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	TMEM179	Q6ZVK1	233 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	CCDC50	Q8IVM0	306 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	DYDC1	Q8WWB3	177 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	DCC	P43146	1447 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	SPP2	Q13103	211 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	NCAPG2	Q86XI2	1143 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	IMPG2	Q9BZV3	1241 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	NBPF3	Q9H094	633 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	EMILIN3	Q9NT22	766 aa		13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-223	ENST00000324771	CNTNAP5	Q8WYK1	1306 aa		13.05	□□□□□ -0.32

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