RNA–Protein interactions for RNA: ENST00000322326.12

IFT20-201, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-201ENST00000322326 ZBED4O75132 1171 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 DUSP11O75319 330 aaKnown RBP18.4■□□□□ 0.54
IFT20-201ENST00000322326 SNAI1O95863 264 aaPredicted RBP18.4■□□□□ 0.54
IFT20-201ENST00000322326 GOLGA8HP0CJ92 632 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 IFNAR1P17181 557 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
IFT20-201ENST00000322326 KCNA10Q16322 511 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 RASGRP2Q7LDG7 609 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 ZNF467Q7Z7K2 595 aaPredicted RBP18.4■□□□□ 0.54
IFT20-201ENST00000322326 STAG2Q8N3U4 1231 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 NSUN7Q8NE18 718 aaKnown RBP18.4■□□□□ 0.54
IFT20-201ENST00000322326 KLHDC9Q8NEP7 349 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 GLT1D1Q96MS3 346 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 MYH6P13533 1939 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 DNAH12Q6ZR08 3092 aa18.4■□□□□ 0.54
IFT20-201ENST00000322326 DNAJC25-GNG10A0A024R161 153 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 ATP2A1O14983 1001 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 CST5P28325 142 aaPredicted RBP18.39■□□□□ 0.53
IFT20-201ENST00000322326 SMARCA1P28370 1054 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 IKQ13123 557 aaPredicted RBP18.39■□□□□ 0.53
IFT20-201ENST00000322326 NTRK3Q16288 839 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 CCDC174Q6PII3 467 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 CPXCR1Q8N123 301 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 PCSK9Q8NBP7 692 aaKnown RBP18.39■□□□□ 0.53
IFT20-201ENST00000322326 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 FBXO40Q9UH90 709 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 RIPK3Q9Y572 518 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 ELP1O95163 1332 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 STK36Q9NRP7 1315 aa18.39■□□□□ 0.53
IFT20-201ENST00000322326 A0A0C4DFX4 3053 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 TIMP1P01033 207 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
IFT20-201ENST00000322326 DNAJB2P25686 324 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 AKAP17AQ02040 695 aaKnown RBP18.38■□□□□ 0.53
IFT20-201ENST00000322326 SSRP1Q08945 709 aaKnown RBP18.38■□□□□ 0.53
IFT20-201ENST00000322326 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 SMARCC2Q8TAQ2 1214 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
IFT20-201ENST00000322326 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
IFT20-201ENST00000322326 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.38■□□□□ 0.53
IFT20-201ENST00000322326 CNTNAP5Q8WYK1 1306 aa18.38■□□□□ 0.53
IFT20-201ENST00000322326 TMEM232C9JQI7 657 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 STAT2P52630 851 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 PPIGQ13427 754 aaKnown RBP eCLIP18.37■□□□□ 0.53
IFT20-201ENST00000322326 CCSAPQ6IQ19 270 aaPredicted RBP18.37■□□□□ 0.53
IFT20-201ENST00000322326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.53
IFT20-201ENST00000322326 FAM160B2Q86V87 743 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 CMTR1Q8N1G2 835 aaKnown RBP18.37■□□□□ 0.53
IFT20-201ENST00000322326 ANKRD35Q8N283 1001 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 CCDC82Q8N4S0 544 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
IFT20-201ENST00000322326 CHST13Q8NET6 341 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 CHURC1Q8WUH1 139 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 KIFC2Q96AC6 838 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 VTI1AQ96AJ9 217 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 SLC26A6Q9BXS9 759 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 RAVER2Q9HCJ3 691 aaKnown RBP18.37■□□□□ 0.53
IFT20-201ENST00000322326 FEM1BQ9UK73 627 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 TBX21Q9UL17 535 aa18.37■□□□□ 0.53
IFT20-201ENST00000322326 JAK2O60674 1132 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 PLA2G6O60733 806 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 GJB2P29033 226 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 OAZ1P54368 228 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 FUT2Q10981 343 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 MFSD5Q6N075 450 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 BTNL9Q6UXG8 535 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 WASF1Q92558 559 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 PHKBQ93100 1093 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
IFT20-201ENST00000322326 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
IFT20-201ENST00000322326 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
IFT20-201ENST00000322326 MYADML2A6NDP7 307 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
IFT20-201ENST00000322326 PRPF3O43395 683 aaKnown RBP18.35■□□□□ 0.53
IFT20-201ENST00000322326 DEXIO95424 95 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 ASGR1P07306 291 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 CDK7P50613 346 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 GJA9P57773 515 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 GRIN2CQ14957 1233 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 TTBK2Q6IQ55 1244 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 TIFAQ96CG3 184 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
IFT20-201ENST00000322326 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
IFT20-201ENST00000322326 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
IFT20-201ENST00000322326 UPF3AQ9H1J1 476 aaKnown RBP18.35■□□□□ 0.53
IFT20-201ENST00000322326 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms