RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
KARS-202ENST00000319410 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
KARS-202ENST00000319410 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
KARS-202ENST00000319410 MICAL1Q8TDZ2 1067 aa11.09□□□□□ -0.63
KARS-202ENST00000319410 KANSL2Q9H9L4 492 aa11.09□□□□□ -0.63
KARS-202ENST00000319410 LAMA4Q16363 1823 aa11.09□□□□□ -0.63
KARS-202ENST00000319410 CYP2B6P20813 491 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 UBXN2AP68543 259 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 PTH1RQ03431 593 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 PDIA5Q14554 519 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 FOXD4L6Q3SYB3 417 aaPredicted RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 KIAA1755Q5JYT7 1200 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 FOXD4L3Q6VB84 417 aaPredicted RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 MMTAG2Q9BU76 263 aaKnown RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 KIAA1683Q9H0B3 1180 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 RMI1Q9H9A7 625 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 TCP11L1Q9NUJ3 509 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 IGKV6D-41A0A0C4DH26 115 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 RTN2O75298 545 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 ECEL1O95672 775 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 USP14P54578 494 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 ERVK-24P63145 666 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 SCRN1Q12765 414 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 MFSD6Q6ZSS7 791 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 KIAA1328Q86T90 577 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 TCP11Q8WWU5 503 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 CNNM2Q9H8M5 875 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 GJD2Q9UKL4 321 aa11.08□□□□□ -0.64
KARS-202ENST00000319410 GREB1LQ9C091 1923 aaPredicted RBP11.08□□□□□ -0.64
KARS-202ENST00000319410 MYH8P13535 1937 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 AP1G2O75843 785 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 CASTP20810 708 aaKnown RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 IRF5Q13568 498 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 CDC37Q16543 378 aaPredicted RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 SIAH1Q8IUQ4 282 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 RBM12BQ8IXT5 1001 aaKnown RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 KRT23Q9C075 422 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 CNMDO75829 334 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 CD2BP2O95400 341 aaKnown RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 GJB1P08034 283 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 NOVP48745 357 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 NECTIN1Q15223 517 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 CATSPERGQ6ZRH7 1159 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 CCAR1Q8IX12 1150 aaKnown RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 SPC24Q8NBT2 197 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 U2AF1L4Q8WU68 220 aaKnown RBP11.07□□□□□ -0.64
KARS-202ENST00000319410 TANGO6Q9C0B7 1094 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 ARHGEF10LQ9HCE6 1279 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 ODF2LQ9ULJ1 636 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
KARS-202ENST00000319410 CHUKO15111 745 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 TPD52L2O43399 206 aaKnown RBP11.06□□□□□ -0.64
KARS-202ENST00000319410 RAD21O60216 631 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 PTGS1P23219 599 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 GCKP35557 465 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 GJA8P48165 433 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 ERCC6LQ2NKX8 1250 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 CCDC183Q5T5S1 534 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 TRIB2Q92519 343 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 ESR2Q92731 530 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
KARS-202ENST00000319410 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 BTBD7Q9P203 1132 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 RANBP2P49792 3224 aaKnown RBP11.06□□□□□ -0.64
KARS-202ENST00000319410 TUBB4AP04350 444 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 CYP21A2P08686 494 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 TSPY3P0CV98 308 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 TSPY8P0CW00 308 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 CCL14Q16627 93 aa11.06□□□□□ -0.64
KARS-202ENST00000319410 PREPLQ4J6C6 727 aaPredicted RBP11.06□□□□□ -0.64
KARS-202ENST00000319410 ARHGAP29Q52LW3 1261 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms