RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CTAGE1Q96RT6 745 aa15.71■□□□□ 0.11
SYCN-201ENST00000318438 VPS13AQ96RL7 3174 aa15.71■□□□□ 0.11
SYCN-201ENST00000318438 SCN10AQ9Y5Y9 1956 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 ABHD14A-ACY1A0A1B0GW23 586 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 ALAS1P13196 640 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 SELPP16109 830 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 SMAD2Q15796 467 aaKnown RBP15.7■□□□□ 0.1
SYCN-201ENST00000318438 EPC2Q52LR7 807 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 MUM1L1Q5H9M0 696 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 CTR9Q6PD62 1173 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 LRRC8DQ7L1W4 858 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 RPAINQ86UA6 219 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 ATOH1Q92858 354 aaPredicted RBP15.7■□□□□ 0.1
SYCN-201ENST00000318438 TRERF1Q96PN7 1200 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
SYCN-201ENST00000318438 POP1Q99575 1024 aaKnown RBP15.7■□□□□ 0.1
SYCN-201ENST00000318438 LRRCC1Q9C099 1032 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
SYCN-201ENST00000318438 GREB1LQ9C091 1923 aaPredicted RBP15.69■□□□□ 0.1
SYCN-201ENST00000318438 CXCL10P02778 98 aa15.69■□□□□ 0.1
SYCN-201ENST00000318438 RASA1P20936 1047 aa15.69■□□□□ 0.1
SYCN-201ENST00000318438 PTPN11Q06124 597 aaPredicted RBP15.69■□□□□ 0.1
SYCN-201ENST00000318438 LRRC47Q8N1G4 583 aaKnown RBP15.69■□□□□ 0.1
SYCN-201ENST00000318438 CCDC155Q8N6L0 562 aa15.69■□□□□ 0.1
SYCN-201ENST00000318438 CAGE1Q8TC20 777 aa15.69■□□□□ 0.1
SYCN-201ENST00000318438 MORC4Q8TE76 937 aa15.69■□□□□ 0.1
SYCN-201ENST00000318438 DHX38Q92620 1227 aaKnown RBP15.69■□□□□ 0.1
SYCN-201ENST00000318438 NSUN3Q9H649 340 aaKnown RBP15.69■□□□□ 0.1
SYCN-201ENST00000318438 ISY1Q9ULR0 285 aaKnown RBP15.69■□□□□ 0.1
SYCN-201ENST00000318438 INSL6Q9Y581 213 aa15.69■□□□□ 0.1
SYCN-201ENST00000318438 MBTPS2O43462 519 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 CHGBP05060 677 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 VCPP55072 806 aaKnown RBP15.68■□□□□ 0.1
SYCN-201ENST00000318438 SNAP25P60880 206 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 DLX2Q07687 328 aaPredicted RBP15.68■□□□□ 0.1
SYCN-201ENST00000318438 GPM6BQ13491 265 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 PKN1Q16512 942 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 GDF6Q6KF10 455 aaPredicted RBP15.68■□□□□ 0.1
SYCN-201ENST00000318438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYCN-201ENST00000318438 FBXL6Q8N531 539 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
SYCN-201ENST00000318438 TMEM232C9JQI7 657 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 H3BNC9 293 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 BMP3P12645 472 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 IKBKEQ14164 716 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 TKFCQ3LXA3 575 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
SYCN-201ENST00000318438 NSMFQ6X4W1 530 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 ASCL5Q7RTU5 278 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 ERMP1Q7Z2K6 904 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 COPS5Q92905 334 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 DDRGK1Q96HY6 314 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 DCTPP1Q9H773 170 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 SLC4A4Q9Y6R1 1079 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 WDR87Q6ZQQ6 2873 aa15.67■□□□□ 0.1
SYCN-201ENST00000318438 KMT2EQ8IZD2 1858 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 IGKV6D-41A0A0C4DH26 115 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 STXBP3O00186 592 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 CKBP12277 381 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 ATP5JP18859 108 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 ADD2P35612 726 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 HTRA4P83105 476 aaPredicted RBP15.66■□□□□ 0.1
SYCN-201ENST00000318438 MYOCDQ8IZQ8 938 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
SYCN-201ENST00000318438 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 MKNK2Q9HBH9 465 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 RAD50Q92878 1312 aa15.66■□□□□ 0.1
SYCN-201ENST00000318438 RIF1Q5UIP0 2472 aaKnown RBP15.66■□□□□ 0.1
SYCN-201ENST00000318438 TRIP12Q14669 1992 aaPredicted RBP15.66■□□□□ 0.1
SYCN-201ENST00000318438 RBM47A0AV96 593 aaKnown RBP15.65■□□□□ 0.1
SYCN-201ENST00000318438 A6NJR5 290 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 H0Y858 1186 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 KPNA6O60684 536 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 EFCAB14O75071 495 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 FDX1P10109 184 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 ALDH5A1P51649 535 aaPredicted RBP15.65■□□□□ 0.1
SYCN-201ENST00000318438 STAT2P52630 851 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 ZXDAP98168 799 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 IKQ13123 557 aaPredicted RBP15.65■□□□□ 0.1
SYCN-201ENST00000318438 CTC1Q2NKJ3 1217 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 SLFN13Q68D06 897 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 GMCL1P1Q8NEA9 526 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 CEP95Q96GE4 821 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 TLR9Q9NR96 1032 aa15.65■□□□□ 0.1
SYCN-201ENST00000318438 LCTP09848 1927 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 COL4A6Q14031 1691 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 SMARCA5O60264 1052 aaPredicted RBP15.64■□□□□ 0.09
SYCN-201ENST00000318438 PARNO95453 639 aaKnown RBP15.64■□□□□ 0.09
SYCN-201ENST00000318438 RBL2Q08999 1139 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 HYAL1Q12794 435 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 SMAD4Q13485 552 aaKnown RBP15.64■□□□□ 0.09
SYCN-201ENST00000318438 MBTPS1Q14703 1052 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 PPP2R5BQ15173 497 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 MKL1Q969V6 931 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 SAMD11Q96NU1 681 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 PAG1Q9NWQ8 432 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 ARPP21Q9UBL0 812 aaPredicted RBP15.64■□□□□ 0.09
SYCN-201ENST00000318438 MYO7AQ13402 2215 aa15.64■□□□□ 0.09
SYCN-201ENST00000318438 PLXNA3P51805 1871 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms