RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NF2P35240 595 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 PDE4DQ08499 809 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 STK4Q13043 487 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 FAM47AQ5JRC9 791 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 TSGA10Q9BZW7 698 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 THAP9Q9H5L6 903 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 SLC40A1Q9NP59 571 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 CAMTA1Q9Y6Y1 1673 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 MYH13Q9UKX3 1938 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 GOLGA6L7A0A1B0GV03 622 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 CHUKO15111 745 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 TCP1P17987 556 aaKnown RBP10.7□□□□□ -0.7
PTPRA-202ENST00000318266 TMOD1P28289 359 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 ARID4AP29374 1257 aaPredicted RBP10.7□□□□□ -0.7
PTPRA-202ENST00000318266 SLC1A4P43007 532 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 MMP14P50281 582 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 ASIC1P78348 528 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 ARID5AQ03989 594 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 PUM3Q15397 648 aaKnown RBP10.7□□□□□ -0.7
PTPRA-202ENST00000318266 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 IFT20Q8IY31 132 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 CCDC155Q8N6L0 562 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 TLR10Q9BXR5 811 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 TMEM60Q9H2L4 133 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.74e-7■■□□□ 13.3
PTPRA-202ENST00000318266 ODF2LQ9ULJ1 636 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 USP54Q70EL1 1684 aa10.7□□□□□ -0.7
PTPRA-202ENST00000318266 LRRC53A6NM62 1247 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 EPB41P11171 864 aaKnown RBP10.69□□□□□ -0.7
PTPRA-202ENST00000318266 ODF2Q5BJF6 829 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 CCDC121Q6ZUS5 278 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 LRRC15Q8TF66 581 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 SPON1Q9HCB6 807 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 NLRC4Q9NPP4 1024 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 PLAAQ9Y263 795 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 FAM205AQ6ZU69 1335 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 FAM170AA1A519 330 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 RPSAP08865 295 aaKnown RBP10.69□□□□□ -0.7
PTPRA-202ENST00000318266 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
PTPRA-202ENST00000318266 NEDD9Q14511 834 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 MIIPQ5JXC2 388 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 KDM7AQ6ZMT4 941 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 IQCKQ8N0W5 287 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 NOC3LQ8WTT2 800 aaKnown RBP10.69□□□□□ -0.7
PTPRA-202ENST00000318266 LPIN2Q92539 896 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 NUP58Q9BVL2 599 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 HAUS2Q9NVX0 235 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 SCN11AQ9UI33 1791 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 KLRC4O43908 158 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 ELF1P32519 619 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 DYNLL1P63167 89 aaKnown RBP10.69□□□□□ -0.7
PTPRA-202ENST00000318266 TROAPQ12815 778 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 DTHD1Q6ZMT9 781 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 CASKIN2Q8WXE0 1202 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 P2RX5Q93086 422 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 CAVIN3Q969G5 261 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 VCPKMTQ9H867 229 aa10.69□□□□□ -0.7
PTPRA-202ENST00000318266 OPLAHO14841 1288 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 PAK2Q13177 524 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 INF2Q27J81 1249 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 CFAP221Q4G0U5 840 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 DDX42Q86XP3 938 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRA-202ENST00000318266 PIK3R5Q8WYR1 880 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 CYFIP2Q96F07 1278 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 ATP6V1G3Q96LB4 118 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 GOLPH3Q9H4A6 298 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 AKAP11Q9UKA4 1901 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 TJP1Q07157 1748 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 GOLGA6L10A6NI86 522 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 SCG2P13521 617 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 SLC5A1P13866 664 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 EHHADHQ08426 723 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 QPCTQ16769 361 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 CACNA2D4Q7Z3S7 1137 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 NLRP10Q86W26 655 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 GIMAP8Q8ND71 665 aaPredicted RBP10.68□□□□□ -0.7
PTPRA-202ENST00000318266 SLC24A3Q9HC58 644 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 LAMB4A4D0S4 1761 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 MYH7P12883 1935 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 SBF2Q86WG5 1849 aa10.68□□□□□ -0.7
PTPRA-202ENST00000318266 CNTNAP5Q8WYK1 1306 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 KLHDC7AQ5VTJ3 777 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 ZNF662Q6ZS27 426 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 DNAAF5Q86Y56 855 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 KANSL2Q9H9L4 492 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PKD1L3Q7Z443 1732 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 NID2Q14112 1375 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 DNM1LO00429 736 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 KCNQ2O43526 872 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PPP1R12BO60237 982 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PALMO75781 387 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 FAM107AO95990 144 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PLCG1P19174 1290 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms