RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 DNAJC18Q9H819 358 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 DCP1AQ9NPI6 582 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 PI4KBQ9UBF8 816 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 SHOX2O60902 331 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 ZMYND10O75800 440 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 CYP2C8P10632 490 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 NCAPHQ15003 741 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 RNF187Q5TA31 235 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-201ENST00000318023 SPICE1Q8N0Z3 855 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 ZSWIM6Q9HCJ5 1215 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
CAPN3-201ENST00000318023 MYH2Q9UKX2 1941 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 GOLGA6CA6NDK9 693 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 ENTPD3O75355 529 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 IPO7O95373 1038 aaKnown RBP10.48□□□□□ -0.73
CAPN3-201ENST00000318023 GOLGA6DP0CG33 693 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 HMGCS2P54868 508 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 CCT2P78371 535 aaKnown RBP10.48□□□□□ -0.73
CAPN3-201ENST00000318023 FAM160A1Q05DH4 1040 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 PTPN18Q99952 460 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 HINFPQ9BQA5 517 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 CAPS2Q9BXY5 557 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 GOLGA6AQ9NYA3 693 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 HPCAL4Q9UM19 191 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 PPP2R3BQ9Y5P8 575 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 MYO5AQ9Y4I1 1855 aaKnown RBP10.48□□□□□ -0.73
CAPN3-201ENST00000318023 KIAA0100Q14667 2235 aaKnown RBP10.48□□□□□ -0.73
CAPN3-201ENST00000318023 NDUFAB1O14561 156 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 NAP1L1P55209 391 aaKnown RBP10.48□□□□□ -0.73
CAPN3-201ENST00000318023 WLSQ5T9L3 541 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 ZNF589Q86UQ0 364 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-201ENST00000318023 SERPINB13Q9UIV8 391 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 CDC23Q9UJX2 597 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 GRIN2DO15399 1336 aa10.48□□□□□ -0.73
CAPN3-201ENST00000318023 CDC25CP30307 473 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 GBP2P32456 591 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 AMOTL1Q8IY63 956 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 MSL3Q8N5Y2 521 aaKnown RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 BRI3BPQ8WY22 251 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 CFAP45Q9UL16 551 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 PDS5AQ29RF7 1337 aaKnown RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 EIF3HO15372 352 aaKnown RBP eCLIP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 FKBP1BP68106 108 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 CTDSPL2Q05D32 466 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 TAF1CQ15572 869 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 ENGASEQ8NFI3 743 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 APPBP2Q92624 585 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 USP28Q96RU2 1077 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 STAP2Q9UGK3 403 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 CPA4Q9UI42 421 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 FSBPO95073 299 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 PPP4CP60510 307 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 MTMR2Q13614 643 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 KCNB1Q14721 858 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 FAM47AQ5JRC9 791 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 ZNF569Q5MCW4 686 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 SPDYE1Q8NFV5 336 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 GBP3Q9H0R5 595 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 G3BP2Q9UN86 482 aaKnown RBP10.47□□□□□ -0.73
CAPN3-201ENST00000318023 TAF6LQ9Y6J9 622 aa10.47□□□□□ -0.73
CAPN3-201ENST00000318023 STIM1Q13586 685 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 SEPT2Q15019 361 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 CERKLQ49MI3 558 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-201ENST00000318023 ERO1BQ86YB8 467 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 ACER1Q8TDN7 264 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 NAPBQ9H115 298 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 HSD3B7Q9H2F3 369 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 MKNK2Q9HBH9 465 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 KIAA1468Q9P260 1216 aa10.46□□□□□ -0.73
CAPN3-201ENST00000318023 CTAGE15A4D2H0 777 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 GOLGA6L9A6NEM1 432 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 PHF20L1A8MW92 1017 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 MEFVO15553 781 aaPredicted RBP10.46□□□□□ -0.74
CAPN3-201ENST00000318023 CTAGE8P0CG41 777 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 PTPRAP18433 802 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 AARSP49588 968 aaKnown RBP eCLIP10.46□□□□□ -0.74
CAPN3-201ENST00000318023 CDR1P51861 262 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 RWDD2BP57060 319 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 PPARDQ03181 441 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 PDCLQ13371 301 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 WDR78Q5VTH9 848 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 FKBP1CQ5VVH2 108 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 NCAPH2Q6IBW4 605 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 CTAGE6Q86UF2 777 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 FCHSD1Q86WN1 690 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 CTAGE4Q8IX94 777 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 EVI5LQ96CN4 794 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 CASP8AP2Q9UKL3 1982 aa10.46□□□□□ -0.74
CAPN3-201ENST00000318023 SOWAHDA6NJG2 315 aa10.45□□□□□ -0.74
CAPN3-201ENST00000318023 SNUPNO95149 360 aaKnown RBP10.45□□□□□ -0.74
CAPN3-201ENST00000318023 NDUFA8P51970 172 aa10.45□□□□□ -0.74
CAPN3-201ENST00000318023 GUCY1B3Q02153 619 aa10.45□□□□□ -0.74
CAPN3-201ENST00000318023 CRHR2Q13324 411 aa10.45□□□□□ -0.74
CAPN3-201ENST00000318023 UBE3CQ15386 1083 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms