RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PCDHA1Q9Y5I3 950 aa8.1□□□□□ -1.11
NPHP1-201ENST00000316534 CLRN2A0PK11 232 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 PPP2R5CQ13362 524 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 RASA3Q14644 834 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 R3HDM1Q15032 1099 aaKnown RBP8.09□□□□□ -1.11
NPHP1-201ENST00000316534 CALCRLQ16602 461 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 SLFN12Q8IYM2 578 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 CHURC1Q8WUH1 139 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 JDP2Q8WYK2 163 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 RAD54LQ92698 747 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 DNAJC19Q96DA6 116 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 TRIM44Q96DX7 344 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-201ENST00000316534 HOOK2Q96ED9 719 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 SLC38A10Q9HBR0 1119 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 HACL1Q9UJ83 578 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 KDM3AQ9Y4C1 1321 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 GOLGA6L6A8MZA4 724 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 MPHOSPH10O00566 681 aaKnown RBP8.09□□□□□ -1.11
NPHP1-201ENST00000316534 PLCG1P19174 1290 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 GSDMDP57764 484 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
NPHP1-201ENST00000316534 POLR3CQ9BUI4 534 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-201ENST00000316534 ADD3Q9UEY8 706 aaKnown RBP8.09□□□□□ -1.11
NPHP1-201ENST00000316534 DDX25Q9UHL0 483 aaKnown RBP8.09□□□□□ -1.11
NPHP1-201ENST00000316534 LMNB1P20700 586 aa8.09□□□□□ -1.12
NPHP1-201ENST00000316534 PSMD2Q13200 908 aa8.09□□□□□ -1.12
NPHP1-201ENST00000316534 KARSQ15046 597 aaKnown RBP8.09□□□□□ -1.12
NPHP1-201ENST00000316534 UBE2SQ16763 222 aa8.09□□□□□ -1.12
NPHP1-201ENST00000316534 DHTKD1Q96HY7 919 aaPredicted RBP8.09□□□□□ -1.12
NPHP1-201ENST00000316534 XPO4Q9C0E2 1151 aaKnown RBP8.09□□□□□ -1.12
NPHP1-201ENST00000316534 PP2D1A8MPX8 630 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 TMEM232C9JQI7 657 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 GOLGA6L19H0YKK7 550 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 TXLNAP40222 546 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 HIRAP54198 1017 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 TTI2Q6NXR4 508 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 HOMER1Q86YM7 354 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 SCYL3Q8IZE3 742 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 EMILIN3Q9NT22 766 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 FAM53CQ9NYF3 392 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 CNOT7Q9UIV1 285 aaKnown RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 PSMD10O75832 226 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 TPM2P07951 284 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 SLC12A3P55017 1021 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 ARHGAP4P98171 946 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 CCDC96Q2M329 555 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 LETM2Q2VYF4 491 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 ZCWPW2Q504Y3 356 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 JAKMIP3Q5VZ66 844 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 RRAGBQ5VZM2 374 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 LBX2Q6XYB7 198 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 UNC13DQ70J99 1090 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 ZSCAN29Q8IWY8 852 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 CACTINQ8WUQ7 758 aaKnown RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 THAP9Q9H5L6 903 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 RTN4Q9NQC3 1192 aaKnown RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 FANCLQ9NW38 375 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 FAM86B1E9PN63 330 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 FAM86B2P0C5J1 330 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 NFIL3Q16649 462 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 CENPPQ6IPU0 288 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 ARMCX5Q6P1M9 558 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 ZNF507Q8TCN5 953 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 NOC3LQ8WTT2 800 aaKnown RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 NAP1L5Q96NT1 182 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 NUP88Q99567 741 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 GLIS2Q9BZE0 524 aaPredicted RBP8.08□□□□□ -1.12
NPHP1-201ENST00000316534 NRBP1Q9UHY1 535 aa8.08□□□□□ -1.12
NPHP1-201ENST00000316534 SYNRGQ9UMZ2 1314 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 ATP1A3P13637 1013 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 STAT6P42226 847 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 FAM83BQ5T0W9 1011 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 EPM2AIP1Q7L775 607 aaPredicted RBP8.07□□□□□ -1.12
NPHP1-201ENST00000316534 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 CCDC150Q8NCX0 1101 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.07□□□□□ -1.12
NPHP1-201ENST00000316534 KLRG1Q96E93 195 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 DUSP9Q99956 384 aaKnown RBP8.07□□□□□ -1.12
NPHP1-201ENST00000316534 TRIM34Q9BYJ4 488 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 PYCARDQ9ULZ3 195 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 AFG3L2Q9Y4W6 797 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 ASTN2O75129 1339 aaPredicted RBP8.07□□□□□ -1.12
NPHP1-201ENST00000316534 UNCXA6NJT0 531 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 MEIS1O00470 390 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 IRF6O14896 467 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
NPHP1-201ENST00000316534 PRKCSHP14314 528 aaPredicted RBP8.07□□□□□ -1.12
NPHP1-201ENST00000316534 TPM4P67936 248 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 BMT2Q1RMZ1 405 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 NYAP1Q6ZVC0 841 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 LRRC27Q9C0I9 530 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 MRPL11Q9Y3B7 192 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms