RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ZNF792Q3KQV3 632 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 RNF207Q6ZRF8 634 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 ZNF274Q96GC6 653 aaPredicted RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 ALDH8A1Q9H2A2 487 aaPredicted RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 CYP39A1Q9NYL5 469 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 NID2Q14112 1375 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 DNAJC25-GNG10A0A024R161 153 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 CCDC196A0A1B0GTZ2 297 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 CPLX1O14810 134 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 PFKFB2O60825 505 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 CFBP00751 764 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 HOXC6P09630 235 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 XRCC5P13010 732 aaKnown RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 HOXA13P31271 388 aaPredicted RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 RPS6P62753 249 aaKnown RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 ST3GAL1Q11201 340 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 RABEP1Q15276 862 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 ANKRD1Q15327 319 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 NTRK3Q16288 839 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 PRAMEF19Q5SWL8 479 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 WWC2Q6AWC2 1192 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 ABRAQ8N0Z2 381 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 MAML3Q96JK9 1138 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 FGD4Q96M96 766 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
CDC42-201ENST00000315554 MRPL11Q9Y3B7 192 aaKnown RBP9.08□□□□□ -0.96
CDC42-201ENST00000315554 ASTN1O14525 1302 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 HMGCRP04035 888 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 CCND3P30281 292 aaPredicted RBP9.07□□□□□ -0.96
CDC42-201ENST00000315554 FOSBP53539 338 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 CACNB2Q08289 660 aaPredicted RBP9.07□□□□□ -0.96
CDC42-201ENST00000315554 PKN1Q16512 942 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.961e-7■■■■□ 25.8
CDC42-201ENST00000315554 CCDC83Q8IWF9 413 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 FAM133AQ8N9E0 248 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 SYTL5Q8TDW5 730 aaPredicted RBP9.07□□□□□ -0.96
CDC42-201ENST00000315554 PXYLP1Q8TE99 480 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 ZNF333Q96JL9 665 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 TAAR1Q96RJ0 339 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 ZMYND15Q9H091 742 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 SLC5A4Q9NY91 659 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 COL20A1Q9P218 1284 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 PNMA2Q9UL42 364 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 LIMCH1Q9UPQ0 1083 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 PFASO15067 1338 aa9.07□□□□□ -0.96
CDC42-201ENST00000315554 ZNF236Q9UL36 1845 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 STXBP3O00186 592 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 ADAMTS3O15072 1205 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 PRPF3O43395 683 aaKnown RBP9.06□□□□□ -0.96
CDC42-201ENST00000315554 CTDNEP1O95476 244 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 CCL5P13501 91 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 IFNAR1P17181 557 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 CNGA1P29973 690 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 NAPAP54920 295 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 SOX10P56693 466 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 UBXN2AP68543 259 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 AKAP17AQ02040 695 aaKnown RBP9.06□□□□□ -0.96
CDC42-201ENST00000315554 SSRP1Q08945 709 aaKnown RBP9.06□□□□□ -0.96
CDC42-201ENST00000315554 PPP2R5BQ15173 497 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 UBE2SQ16763 222 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 MFSD14CQ5VZR4 134 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 USP17L6PQ6QN14 398 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 ARMCX2Q7L311 632 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 EEPD1Q7L9B9 569 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 MCF2L2Q86YR7 1114 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 TRPV1Q8NER1 839 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 GTF3C6Q969F1 213 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 ARMC5Q96C12 935 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 SHISA4Q96DD7 197 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 ZFP91Q96JP5 570 aaPredicted RBP9.06□□□□□ -0.96
CDC42-201ENST00000315554 AIFM3Q96NN9 605 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 MYH6P13533 1939 aa9.06□□□□□ -0.96
CDC42-201ENST00000315554 ZNFX1Q9P2E3 1918 aaKnown RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 GCOM1H8Y6P7 765 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 JAK2O60674 1132 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 SNAI1O95863 264 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 POLR2MP0CAP2 368 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 SCG2P13521 617 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 ALDH5A1P51649 535 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 PFKFB3Q16875 520 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 ANO1Q5XXA6 986 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 OLFML2BQ68BL8 750 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 TRMT44Q8IYL2 757 aaKnown RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 PGBD1Q96JS3 809 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 RNF208Q9H0X6 261 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 VPS54Q9P1Q0 977 aa9.05□□□□□ -0.96
CDC42-201ENST00000315554 ZHX1Q9UKY1 873 aaPredicted RBP9.05□□□□□ -0.96
CDC42-201ENST00000315554 DIS3Q9Y2L1 958 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms