RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 IRF5Q13568 498 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 ARHGEF6Q15052 776 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 PWP2Q15269 919 aaKnown RBP14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 SAFBQ15424 915 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 JAKMIP3Q5VZ66 844 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 ZNF467Q7Z7K2 595 aaPredicted RBP14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 FCHSD1Q86WN1 690 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 DNERQ8NFT8 737 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 NPLOC4Q8TAT6 608 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 CRYGNQ8WXF5 182 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 ANO3Q9BYT9 981 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 FOXP1Q9H334 677 aaPredicted RBP14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 GABRQQ9UN88 632 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 MYH6P13533 1939 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 SPDYE3A6NKU9 549 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 KIF28PB7ZC32 967 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 XRCC5P13010 732 aaKnown RBP14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 EDNRBP24530 442 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 HOXD10P28358 340 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 PRMT2P55345 433 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 EARS2Q5JPH6 523 aaKnown RBP14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 OTOP1Q7RTM1 612 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 KRT25Q7Z3Z0 450 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 DPP9Q86TI2 863 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 MORC4Q8TE76 937 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 NSUN6Q8TEA1 469 aaKnown RBP14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 RMDN3Q96TC7 470 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 APBA2Q99767 749 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 PXMP2Q9NR77 195 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 SLC5A4Q9NY91 659 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 ZSWIM8A7E2V4 1837 aa14.47□□□□□ -0.09
CHMP2A-201ENST00000312547 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 VPS37CA5D8V6 355 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 EDIL3O43854 480 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 CYP2B6P20813 491 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 SREBF1P36956 1147 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 ALDH5A1P51649 535 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 PKP1Q13835 747 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 NOSTRINQ8IVI9 506 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 MSL3Q8N5Y2 521 aaKnown RBP14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 MAML3Q96JK9 1138 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 PGBD1Q96JS3 809 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 IWS1Q96ST2 819 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 PDCD2LQ9BRP1 358 aa14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 ADD3Q9UEY8 706 aaKnown RBP14.46□□□□□ -0.09
CHMP2A-201ENST00000312547 PLXNB2O15031 1838 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 RBBP6Q7Z6E9 1792 aaKnown RBP14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 FAM205CA6NFA0 338 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 BRD1O95696 1058 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 EIF2AK2P19525 551 aaKnown RBP14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 RESTQ13127 1097 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 ARHGEF16Q5VV41 709 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 OLFML2BQ68BL8 750 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 VSIG10LQ86VR7 867 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 IL31RAQ8NI17 732 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 FLRT1Q9NZU1 646 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 ZDHHC9Q9Y397 364 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 TRIM17Q9Y577 477 aa14.45□□□□□ -0.1
CHMP2A-201ENST00000312547 MGAMO43451 1857 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 CCDC194A0A1B0GVG4 234 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 NR3C2P08235 984 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 CYP3A4P08684 503 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 ZSCAN22P10073 491 aaPredicted RBP14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 ARHGAP4P98171 946 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 PGM5Q15124 567 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 NONOQ15233 471 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 CCL14Q16627 93 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 PCNX4Q63HM2 1172 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 XRRA1Q6P2D8 792 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 PIK3AP1Q6ZUJ8 805 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 TBCKQ8TEA7 893 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 TINF2Q9BSI4 451 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 EHMT1Q9H9B1 1298 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 LCTP09848 1927 aa14.44□□□□□ -0.1
CHMP2A-201ENST00000312547 SYNGAP1Q96PV0 1343 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 ASB14A6NK59 587 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 SLC34A2O95436 690 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 SNAI1O95863 264 aaPredicted RBP14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 CIITAP33076 1130 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 USP11P51784 963 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 UBXN2AP68543 259 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 MRPS9P82933 396 aaKnown RBP14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 INF2Q27J81 1249 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 ARMCX2Q7L311 632 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 CTU1Q7Z7A3 348 aaKnown RBP14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 FERMT3Q86UX7 667 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 TRMT44Q8IYL2 757 aaKnown RBP14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 PXYLP1Q8TE99 480 aa14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 CIZ1Q9ULV3 898 aaPredicted RBP14.43□□□□□ -0.1
CHMP2A-201ENST00000312547 B4DLN1 442 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 CCND2P30279 289 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 TRAPPC10P48553 1259 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 TOB1P50616 345 aaPredicted RBP14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 GNL2Q13823 731 aaKnown RBP14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 NEK8Q86SG6 692 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms