RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MYBL1P10243 752 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 GARSP41250 739 aaKnown RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 FAM204AQ9H8W3 233 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 RRP15Q9Y3B9 282 aaKnown RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 IL17RAQ96F46 866 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 GOLGA8TH3BQL2 631 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 GOLGA8HP0CJ92 632 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 RINT1Q6NUQ1 792 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 C2CD5Q86YS7 1000 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 ZC3H12CQ9C0D7 883 aaKnown RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 KRT16P08779 473 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 TBCCQ15814 346 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 TCP11Q8WWU5 503 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 DRC1Q96MC2 740 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 KIFC3Q9BVG8 833 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 SCINQ9Y6U3 715 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 SDCCAG8Q86SQ7 713 aaPredicted RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 TADA2BQ86TJ2 420 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 HPS3Q969F9 1004 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 PTCD1O75127 700 aaKnown RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 C4orf22Q6V702 233 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 DHX36Q9H2U1 1008 aaKnown RBP9.61□□□□□ -0.87
COL6A5-202ENST00000312481 STOML1Q9UBI4 398 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 AGTPBP1Q9UPW5 1226 aa9.61□□□□□ -0.87
COL6A5-202ENST00000312481 MBD4O95243 580 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 HAND2P61296 217 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 TUBGCP2Q9BSJ2 902 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 CNPY3Q9BT09 278 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ATF7P17544 494 aaPredicted RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ASIC3Q9UHC3 531 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 PVALEFA0A1B0GWK0 134 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ITGA6P23229 1130 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 GNPTABQ3T906 1256 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ANKRD20A4Q4UJ75 823 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ANKRD20A8PQ5CZ79 823 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ANKRD20A2Q5SQ80 823 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ANKRD20A1Q5TYW2 823 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 TRIM15Q9C019 465 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 PDS5AQ29RF7 1337 aaKnown RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 SCN11AQ9UI33 1791 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 RSPH10B2B2RC85 870 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 E7EVH7 732 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 RSPH10BP0C881 870 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 MECOMQ03112 1051 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 LONRF3Q496Y0 759 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 CCDC105Q8IYK2 499 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 C1orf112Q9NSG2 853 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 SRGAP2BP0DMP2 458 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 DMP1Q13316 513 aaPredicted RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 MUM1Q2TAK8 710 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 GGA2Q9UJY4 613 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 MRPL11Q9Y3B7 192 aaKnown RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 FAM187AA6NFU0 413 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 SPAG6O75602 509 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 FOXR2Q6PJQ5 311 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 FRMD8P1Q9BZ68 369 aaPredicted RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 KIF9Q9HAQ2 790 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 SCOCQ9UIL1 159 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 A0A1W2PQJ5 194 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 FOXO3O43524 673 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 RIPPLY1Q0D2K3 151 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 ICE2Q659A1 982 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 APOA5Q6Q788 366 aa9.6□□□□□ -0.87
COL6A5-202ENST00000312481 GIMAP8Q8ND71 665 aaPredicted RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 MRPL44Q9H9J2 332 aaKnown RBP9.6□□□□□ -0.87
COL6A5-202ENST00000312481 PRLRP16471 622 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 GPATCH11Q8N954 259 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 LZICQ8WZA0 190 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 STRIP2Q9ULQ0 834 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 XPOTO43592 962 aaKnown RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PDE8BO95263 885 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 NDUFA10O95299 355 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PPARAQ07869 468 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 TSPYL6Q8N831 410 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 NOP53Q9NZM5 478 aaKnown RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PCDHA4Q9UN74 947 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 UBN2Q6ZU65 1347 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 NFAT5O94916 1531 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 SSU72P8A0A1W2PR75 194 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 MAPK13O15264 365 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PSMD7P51665 324 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 AP3M2P53677 418 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 E7ENQ6 273 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 STAMBPL1Q96FJ0 436 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PLA2G12BQ9BX93 195 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 NDUFA13Q9P0J0 144 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 FAF1Q9UNN5 650 aaPredicted RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 MED7O43513 233 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms