RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 FGD4Q96M96 766 aa13.18□□□□□ -0.3
ZC3HC1-201ENST00000311873 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
ZC3HC1-201ENST00000311873 SLC25A27O95847 323 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 MCM7P33993 719 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 MAP2K2P36507 400 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 GJA10Q969M2 543 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 SOWAHBA6NEL2 793 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 SLC37A4O43826 429 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 SREBF1P36956 1147 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 TTC38Q5R3I4 469 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 RMDN3Q96TC7 470 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 MMP19Q99542 508 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 MROH8Q9H579 483 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
ZC3HC1-201ENST00000311873 RPTORQ8N122 1335 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 TRAK2O60296 914 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 CCNT1O60563 726 aaKnown RBP13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 COBLO75128 1261 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 FAM86B2P0C5J1 330 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 CCNA1P78396 465 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 PTPAQ15257 358 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 SHCBP1Q8NEM2 672 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 MCM3APO60318 1980 aa13.16□□□□□ -0.3
ZC3HC1-201ENST00000311873 DNAJC25-GNG10A0A024R161 153 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 FCER1AP12319 257 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 ADORA2AP29274 412 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 MARCKSP29966 332 aaPredicted RBP13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 KRT85P78386 507 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 MRPS9P82933 396 aaKnown RBP13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 GRIN1Q05586 938 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 KCTD2Q14681 263 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 PGM5Q15124 567 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 RTEL1Q9NZ71 1219 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
ZC3HC1-201ENST00000311873 PFASO15067 1338 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 FRMPD4Q14CM0 1322 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 FOSP01100 380 aaPredicted RBP13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 PTPREP23469 700 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 PLEKHH3Q7Z736 793 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 LENG9Q96B70 501 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 MGAMO43451 1857 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 LRRC37A2A6NM11 1700 aa13.14□□□□□ -0.31
ZC3HC1-201ENST00000311873 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 MYCLP12524 364 aaPredicted RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 ITGB5P18084 799 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 ALDH5A1P51649 535 aaPredicted RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 PTGDRQ13258 359 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 GRB14Q14449 540 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 IL17AQ16552 155 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 TRIM47Q96LD4 638 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 MAPK4P31152 587 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 COPB2P35606 906 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 PRR16Q569H4 304 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 SPATA32Q96LK8 384 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
ZC3HC1-201ENST00000311873 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
ZC3HC1-201ENST00000311873 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
ZC3HC1-201ENST00000311873 RGS20O76081 388 aa13.12□□□□□ -0.31
ZC3HC1-201ENST00000311873 NR3C2P08235 984 aa13.12□□□□□ -0.31
ZC3HC1-201ENST00000311873 SLC39A14Q15043 492 aa13.12□□□□□ -0.31
ZC3HC1-201ENST00000311873 ZNF792Q3KQV3 632 aa13.12□□□□□ -0.31
ZC3HC1-201ENST00000311873 MORN1Q5T089 497 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms