RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 RFC4P35249 363 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 PPP2R3AQ06190 1150 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 MORC3Q14149 939 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 HDXQ7Z353 690 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 ARHGAP22Q7Z5H3 698 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 FAM114A1Q8IWE2 563 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 WASF1Q92558 559 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 ANKIB1Q9P2G1 1089 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 SMAPO00193 183 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 ZNF18P17022 549 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 SLC4A8Q2Y0W8 1093 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 RILPL1Q5EBL4 403 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 RBM12BQ8IXT5 1001 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 CEP57L1Q8IYX8 460 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 CNBD1Q8NA66 436 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 C17orf50Q8WW18 174 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 PPP1R13BQ96KQ4 1090 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 SDF4Q9BRK5 362 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 EHD4Q9H223 541 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 GAKO14976 1311 aa10.58□□□□□ -0.72
RBFOX1-201ENST00000311745 SPDYE3A6NKU9 549 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 FANCGO15287 622 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 EDIL3O43854 480 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 RASA1P20936 1047 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 SLC7A5Q01650 507 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 CCDC93Q567U6 631 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 TMEM139Q8IV31 216 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 TRIML1Q8N9V2 468 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 EPSTI1Q96J88 318 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 CRNKL1Q9BZJ0 848 aaKnown RBP10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 CD209Q9NNX6 404 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 TCP11L1Q9NUJ3 509 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 SERTAD1Q9UHV2 236 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 SLX4Q8IY92 1834 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 ZNF827Q17R98 1081 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 MICALCLQ6ZW33 695 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 GPR75-ASB3A0A0A6YYF3 556 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 BECN2A8MW95 431 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 DPYDQ12882 1025 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 TCP11Q8WWU5 503 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 CENPOQ9BU64 300 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 UBAP1Q9NZ09 502 aa10.57□□□□□ -0.72
RBFOX1-201ENST00000311745 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 NEMFO60524 1076 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 SERPINB2P05120 415 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 FOXD4Q12950 439 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 SNCBQ16143 134 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 OLFM4Q6UX06 510 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 TRIM22Q8IYM9 498 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 RBM17Q96I25 401 aaKnown RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 MMTAG2Q9BU76 263 aaKnown RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 NAT10Q9H0A0 1025 aaKnown RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 ERICH2A1L162 156 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 GJA8P48165 433 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 PAPOLAP51003 745 aaKnown RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 ATP2C1P98194 919 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 GRM4Q14833 912 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 PTPN21Q16825 1174 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 CDCA2Q69YH5 1023 aaPredicted RBP10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 CERS5Q8N5B7 392 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 IFNKQ9P0W0 207 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 HDAC6Q9UBN7 1215 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 SUN2Q9UH99 717 aa10.56□□□□□ -0.72
RBFOX1-201ENST00000311745 POLR2DO15514 142 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 RNF40O75150 1001 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 SMIM24O75264 130 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 GNAT1P11488 350 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 ZNF24P17028 368 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 CASP1P29466 404 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 KRT2P35908 639 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 TBX2Q13207 712 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 TRIM29Q14134 588 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 SFMBT2Q5VUG0 894 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 TRIM11Q96F44 468 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 UNC45AQ9H3U1 944 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 MCM9Q9NXL9 1143 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 C10orf71Q711Q0 1435 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 DYTNA2CJ06 578 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 XBP1P17861 261 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 E4F1Q66K89 784 aaPredicted RBP10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 PDXDC2PQ6P474 469 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 NACA2Q9H009 215 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 PAPOLBQ9NRJ5 636 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 RABL2BQ9UNT1 228 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 FLT1P17948 1338 aa10.55□□□□□ -0.72
RBFOX1-201ENST00000311745 PLIN4Q96Q06 1357 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms