RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 AKR1B1P15121 316 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 PFKFB3Q16875 520 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 ADAT2Q7Z6V5 191 aaKnown RBP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 TADA2BQ86TJ2 420 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 VEZTQ9HBM0 779 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 CLRN2A0PK11 232 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 TRAF5O00463 557 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 PPFIA4O75335 1185 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 ACTN3Q08043 901 aaPredicted RBP14.02□□□□□ -0.16
RETREG3-201ENST00000309428 BRIP1Q9BX63 1249 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 EFCC1Q9HA90 598 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 AGPAT5Q9NUQ2 364 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 RMND1Q9NWS8 449 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 PCDHA4Q9UN74 947 aa14.02□□□□□ -0.16
RETREG3-201ENST00000309428 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 SFI1A8K8P3 1242 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 NDUFA10O95299 355 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 ATP1A1P05023 1023 aaKnown RBP14.02□□□□□ -0.17
RETREG3-201ENST00000309428 HOXA13P31271 388 aaPredicted RBP14.02□□□□□ -0.17
RETREG3-201ENST00000309428 APBA1Q02410 837 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 GUCY2DQ02846 1103 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 CEP85LQ5SZL2 805 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 SEPT12Q8IYM1 358 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 MMS19Q96T76 1030 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 BAIAP2L1Q9UHR4 511 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 DUSP10Q9Y6W6 482 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 STAT3P40763 770 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 SP4Q02446 784 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 STK4Q13043 487 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 CALCRLQ16602 461 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 PRR5LQ6MZQ0 368 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 TMC4Q7Z404 712 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 RDH13Q8NBN7 331 aa14.02□□□□□ -0.17
RETREG3-201ENST00000309428 PROCA1Q8NCQ7 364 aaPredicted RBP14.02□□□□□ -0.17
RETREG3-201ENST00000309428 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 NPHP3-ACAD11A0A0J9YXS1 232 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 ZRANB2O95218 330 aaKnown RBP eCLIP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 C12orf60Q5U649 245 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 GLIS3Q8NEA6 775 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 TBC1D31Q96DN5 1066 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 TACO1Q9BSH4 297 aaKnown RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 SELENOOQ9BVL4 669 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 LRRIQ3A6PVS8 624 aaPredicted RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 RAPGEF1Q13905 1077 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 CABS1Q96KC9 395 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 SPAG5Q96R06 1193 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 CDCA7Q9BWT1 371 aaPredicted RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 NAA15Q9BXJ9 866 aaKnown RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 DDAH1O94760 285 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 MAP2K1Q02750 393 aaPredicted RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 SF3B3Q15393 1217 aaKnown RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 DCAF17Q5H9S7 520 aaPredicted RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 BANK1Q8NDB2 785 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 ZNF512BQ96KM6 892 aaPredicted RBP14.01□□□□□ -0.17
RETREG3-201ENST00000309428 MYH2Q9UKX2 1941 aa14.01□□□□□ -0.17
RETREG3-201ENST00000309428 EIF4E1BA6NMX2 242 aaKnown RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 NKRFO15226 690 aaKnown RBP eCLIP14□□□□□ -0.17
RETREG3-201ENST00000309428 GYPCP04921 128 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 TUBBP07437 444 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 BEND6Q5SZJ8 279 aaPredicted RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 DISC1Q9NRI5 854 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 A0A087WUV0 522 aaPredicted RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 USP17L10C9JJH3 530 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 MOCS3O95396 460 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 PLEKP08567 350 aaPredicted RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 OR52Z1P0C646 297 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 GSTO1P78417 241 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 NFIAQ12857 509 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 TMEM266Q2M3C6 531 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 MTRQ99707 1265 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 PCDHA6Q9UN73 950 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 PCDHA8Q9Y5H6 950 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 PPP1R3GB7ZBB8 358 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 RASA1P20936 1047 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 SLC1A4P43007 532 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 PPFIA1Q13136 1202 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 GRAPQ13588 217 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 CCDC93Q567U6 631 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 NAA35Q5VZE5 725 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 GRAPLQ8TC17 118 aaPredicted RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 EHD2Q9NZN4 543 aa14□□□□□ -0.17
RETREG3-201ENST00000309428 FRMD4AQ9P2Q2 1039 aaPredicted RBP14□□□□□ -0.17
RETREG3-201ENST00000309428 STK36Q9NRP7 1315 aa13.99□□□□□ -0.17
RETREG3-201ENST00000309428 FANCGO15287 622 aa13.99□□□□□ -0.17
RETREG3-201ENST00000309428 PEX19P40855 299 aa13.99□□□□□ -0.17
RETREG3-201ENST00000309428 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
RETREG3-201ENST00000309428 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms