RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 CCDC47Q96A33 483 aaKnown RBP23.23■■□□□ 1.31
RELA-201ENST00000308639 CALML4Q96GE6 196 aa23.23■■□□□ 1.31
RELA-201ENST00000308639 CUEDC2Q9H467 287 aa23.23■■□□□ 1.31
RELA-201ENST00000308639 MLXIPQ9HAP2 919 aa23.23■■□□□ 1.31
RELA-201ENST00000308639 BTAF1O14981 1849 aa23.23■■□□□ 1.31
RELA-201ENST00000308639 KRT86O43790 486 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 PDHBP11177 359 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 C2CD5Q86YS7 1000 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 ZFP91Q96JP5 570 aaPredicted RBP23.22■■□□□ 1.31
RELA-201ENST00000308639 PSMB7Q99436 277 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 USP14P54578 494 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 C2orf54Q08AI8 447 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 PRR5LQ6MZQ0 368 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 JADE2Q9NQC1 790 aa23.22■■□□□ 1.31
RELA-201ENST00000308639 MYBL2P10244 700 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 CAPN2P17655 700 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 ECM1Q16610 540 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 PAPD7Q5XG87 772 aaKnown RBP23.21■■□□□ 1.31
RELA-201ENST00000308639 SV2BQ7L1I2 683 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
RELA-201ENST00000308639 MTMR9Q96QG7 549 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 MMRN2Q9H8L6 949 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 ARHGAP20Q9P2F6 1191 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 CAPN6Q9Y6Q1 641 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 TNNT3P45378 269 aaPredicted RBP23.21■■□□□ 1.31
RELA-201ENST00000308639 TNNI2P48788 182 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 CNNM4Q6P4Q7 775 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 CAGE1Q8TC20 777 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 SMARCAL1Q9NZC9 954 aa23.21■■□□□ 1.31
RELA-201ENST00000308639 EIF3CLB5ME19 914 aaKnown RBP23.2■■□□□ 1.3
RELA-201ENST00000308639 AKR1B1P15121 316 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 CCDC96Q2M329 555 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 ZSCAN29Q8IWY8 852 aaPredicted RBP23.2■■□□□ 1.3
RELA-201ENST00000308639 TXLNBQ8N3L3 684 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 EIF3CQ99613 913 aaKnown RBP23.2■■□□□ 1.3
RELA-201ENST00000308639 IPO7O95373 1038 aaKnown RBP23.2■■□□□ 1.3
RELA-201ENST00000308639 CENPPQ6IPU0 288 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 ANKRD13CQ8N6S4 541 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 RIN2Q8WYP3 895 aaPredicted RBP23.2■■□□□ 1.3
RELA-201ENST00000308639 LARP4BQ92615 738 aaKnown RBP23.2■■□□□ 1.3
RELA-201ENST00000308639 CCDC42Q96M95 316 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 MAGEF1Q9HAY2 307 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 ZNF287Q9HBT7 754 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 POLLQ9UGP5 575 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 MYH10P35580 1976 aa23.2■■□□□ 1.3
RELA-201ENST00000308639 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 FKBP15Q5T1M5 1219 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 TTBK2Q6IQ55 1244 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 ERGIC2Q96RQ1 377 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 NUP58Q9BVL2 599 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 SLC16A2P36021 539 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 AMPD3Q01432 767 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 VWA3BQ502W6 1294 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 FAM114A1Q8IWE2 563 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 SNX29Q8TEQ0 813 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 CDK5RAP3Q96JB5 506 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 NDST4Q9H3R1 872 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 KANSL2Q9H9L4 492 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 EHD2Q9NZN4 543 aa23.19■■□□□ 1.3
RELA-201ENST00000308639 MOCS3O95396 460 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 GPS2Q13227 327 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 EZH2Q15910 746 aaKnown RBP23.18■■□□□ 1.3
RELA-201ENST00000308639 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
RELA-201ENST00000308639 MXD3Q9BW11 206 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 TBC1D7Q9P0N9 293 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 SIK3Q9Y2K2 1263 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 RGL2O15211 777 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 PPP1R11O60927 126 aaPredicted RBP23.18■■□□□ 1.3
RELA-201ENST00000308639 EIF4A3P38919 411 aaKnown RBP23.18■■□□□ 1.3
RELA-201ENST00000308639 ZSCAN26Q16670 478 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 WDR93Q6P2C0 686 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.18■■□□□ 1.3
RELA-201ENST00000308639 EXOC4Q96A65 974 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 FGFBP2Q9BYJ0 223 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 RIOX1Q9H6W3 641 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 GGA1Q9UJY5 639 aa23.18■■□□□ 1.3
RELA-201ENST00000308639 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 CXCR5P32302 372 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 APBA1Q02410 837 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 KIF5AQ12840 1032 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 RRAGAQ7L523 313 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 RETREG2Q8NC44 543 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 COG1Q8WTW3 980 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 LRRC53A6NM62 1247 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 EIF3JO75822 258 aaKnown RBP23.17■■□□□ 1.3
RELA-201ENST00000308639 ADCY7P51828 1080 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 VAV2P52735 878 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 CACNB1Q02641 598 aaPredicted RBP23.17■■□□□ 1.3
RELA-201ENST00000308639 CCDC170Q8IYT3 715 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 DDX12PQ92771 950 aa23.17■■□□□ 1.3
RELA-201ENST00000308639 SECISBP2LQ93073 1101 aaKnown RBP23.17■■□□□ 1.3
RELA-201ENST00000308639 GTF2IP78347 998 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 UNC13DQ70J99 1090 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 IFIH1Q9BYX4 1025 aaKnown RBP23.16■■□□□ 1.3
RELA-201ENST00000308639 DDX4Q9NQI0 724 aaKnown RBP23.16■■□□□ 1.3
RELA-201ENST00000308639 MTMR4Q9NYA4 1195 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 DAGLAQ9Y4D2 1042 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 SSBP05455 408 aaKnown RBP eCLIP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms