RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 DHX8Q14562 1220 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 NFE2L3Q9Y4A8 694 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 COBLO75128 1261 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 CFBP00751 764 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 RPN1P04843 607 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 SKILP12757 684 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 FEM1BQ9UK73 627 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 DDNO94850 711 aaPredicted RBP25.26■■□□□ 1.63
PDLIM2-202ENST00000308354 GCFC2P16383 781 aaKnown RBP25.26■■□□□ 1.63
PDLIM2-202ENST00000308354 USP11P51784 963 aa25.26■■□□□ 1.63
PDLIM2-202ENST00000308354 KBTBD4Q9NVX7 518 aa25.26■■□□□ 1.63
PDLIM2-202ENST00000308354 UQCRHLA0A096LP55 91 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 PPP1R3GB7ZBB8 358 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 UQCRHP07919 91 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 GRB10Q13322 594 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 MTMR2Q13614 643 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 FAM160B2Q86V87 743 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 CRYGNQ8WXF5 182 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 CALML4Q96GE6 196 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 PCDHA12Q9UN75 941 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 MAPK8IP1Q9UQF2 711 aa25.25■■□□□ 1.63
PDLIM2-202ENST00000308354 PRR16Q569H4 304 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 DLK2Q6UY11 383 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 ENOX1Q8TC92 643 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 WRNIP1Q96S55 665 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 SAMSN1Q9NSI8 373 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 ARMCX5Q6P1M9 558 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 APOBEC3FQ8IUX4 373 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 SNX29Q8TEQ0 813 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 PNMA5Q96PV4 448 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 RAB34Q9BZG1 259 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 GDAQ9Y2T3 454 aa25.24■■□□□ 1.63
PDLIM2-202ENST00000308354 FAM86B1E9PN63 330 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 CBFA2T2O43439 604 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 FAM86B2P0C5J1 330 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 PDIA5Q14554 519 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 PTPN21Q16825 1174 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 LDHDQ86WU2 507 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 AGBL1Q96MI9 1066 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 SYT17Q9BSW7 474 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 KIAA1683Q9H0B3 1180 aa25.23■■□□□ 1.63
PDLIM2-202ENST00000308354 PLA2G6O60733 806 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 FOSP01100 380 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 ERCC5P28715 1186 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 SPP2Q13103 211 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 PRKG1Q13976 671 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 DCAF15Q66K64 600 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 CYP2W1Q8TAV3 490 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 TANGO6Q9C0B7 1094 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 ZNF18P17022 549 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 SREBF1P36956 1147 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 CDK5RAP3Q96JB5 506 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 C16orf45Q96MC5 204 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 RNF181Q9P0P0 153 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 CTNND2Q9UQB3 1225 aa25.22■■□□□ 1.63
PDLIM2-202ENST00000308354 CYP3A7-CYP3A51PA0A087WV96 503 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 CYP3A7P24462 503 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 UBXN2AP68543 259 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 ECM1Q16610 540 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 KMT5BQ4FZB7 885 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 KRT79Q5XKE5 535 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 CCDC150Q8NCX0 1101 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 NAP1L4Q99733 375 aaKnown RBP25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 KCNMB3Q9NPA1 279 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 PIK3CDO00329 1044 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 WDR46O15213 610 aaKnown RBP25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 KLRC4O43908 158 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 ZNF658Q5TYW1 1059 aaPredicted RBP25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 CUEDC2Q9H467 287 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 EMILIN3Q9NT22 766 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 BLOC1S4Q9NUP1 217 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 INTS13Q9NVM9 706 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 RMND1Q9NWS8 449 aa25.21■■□□□ 1.63
PDLIM2-202ENST00000308354 SYNRGQ9UMZ2 1314 aa25.2■■□□□ 1.63
PDLIM2-202ENST00000308354 YBX3P16989 372 aaKnown RBP eCLIP25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 CDK11BP21127 795 aaKnown RBP25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 STAT3P40763 770 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 KCNK18Q7Z418 384 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 SCYL3Q8IZE3 742 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 CPXCR1Q8N123 301 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 LPAR1Q92633 364 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 SLF1Q9BQI6 1058 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 USP27XA6NNY8 438 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 GCOM1H8Y6P7 765 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 POLR2MP0CAP2 368 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 VCAM1P19320 739 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 SFPQP23246 707 aaKnown RBP eCLIP25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 MCM6Q14566 821 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 PRPF38AQ8NAV1 312 aaKnown RBP25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 LENG9Q96B70 501 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 ZFP91Q96JP5 570 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 PRIMPOLQ96LW4 560 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 MBOAT7Q96N66 472 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 TRIM9Q9C026 710 aa25.2■■□□□ 1.62
PDLIM2-202ENST00000308354 ZNF536O15090 1300 aa25.19■■□□□ 1.62
PDLIM2-202ENST00000308354 TRAF1Q13077 416 aa25.19■■□□□ 1.62
PDLIM2-202ENST00000308354 MCTP2Q6DN12 878 aa25.19■■□□□ 1.62
PDLIM2-202ENST00000308354 VSTM4Q8IW00 320 aa25.19■■□□□ 1.62
PDLIM2-202ENST00000308354 CCPG1Q9ULG6 757 aa25.19■■□□□ 1.62
PDLIM2-202ENST00000308354 MRPL11Q9Y3B7 192 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms